RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 OR52N5Q8NH56 324 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 SLC26A7Q8TE54 656 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 HTRA1Q92743 480 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 PROX1Q92786 737 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ADAD1Q96M93 576 aaKnown RBP10.86□□□□□ -0.67
PRKDC-207ENST00000536483 LRRC37BQ96QE4 947 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 OR2M2Q96R28 347 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ASPNQ9BXN1 380 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 NELFAQ9H3P2 528 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 FKRPQ9H9S5 495 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ABCD2Q9UBJ2 740 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 POU2F3Q9UKI9 436 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 A0A1W2PR80 420 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 PHF1O43189 567 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-207ENST00000536483 SLC43A1O75387 559 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 WNT11O96014 354 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 ASAH2BP0C7U1 165 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 FAM157CP0CG43 387 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF83P51522 516 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 CLDN17P56750 224 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 SLC25A3Q00325 362 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 SPOCK1Q08629 439 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 SF3A3Q12874 501 aaKnown RBP eCLIP10.85□□□□□ -0.67
PRKDC-207ENST00000536483 C1DQ13901 141 aaKnown RBP10.85□□□□□ -0.67
PRKDC-207ENST00000536483 C11orf71Q6IPW1 123 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 TTC33Q6PID6 262 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-207ENST00000536483 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 CARM1Q86X55 608 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 UEVLDQ8IX04 471 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 C20orf196Q8IYI0 205 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 MUC15Q8N387 334 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 POU5F2Q8N7G0 328 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 PIK3C3Q8NEB9 887 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 OR5J2Q8NH18 312 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 CMTM5Q96DZ9 223 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 TNFRSF13CQ96RJ3 184 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 DHRS9Q9BPW9 319 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 MEPEQ9NQ76 525 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-207ENST00000536483 CBLN4Q9NTU7 201 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 TAS2R5Q9NYW4 299 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF229Q9UJW7 825 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 SLC7A7Q9UM01 511 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 USP22Q9UPT9 525 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 SH3GLB1Q9Y371 365 aa10.85□□□□□ -0.67
PRKDC-207ENST00000536483 CPSF4LA6NMK7 179 aaKnown RBP10.84□□□□□ -0.67
PRKDC-207ENST00000536483 IGLV1-44P01699 117 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 HLA-DOBP13765 273 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 DSCR9P59020 149 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 ROR2Q01974 943 aaKnown RBP10.84□□□□□ -0.67
PRKDC-207ENST00000536483 LIPEQ05469 1076 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 LGALS3BPQ08380 585 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 LOXL1Q08397 574 aaPredicted RBP10.84□□□□□ -0.67
PRKDC-207ENST00000536483 PMS2P3Q13401 168 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 RAB35Q15286 201 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 TBRG1Q3YBR2 411 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 CYBRD1Q53TN4 286 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF544Q6NX49 715 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 B3GLCTQ6Y288 498 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 C10orf67Q8IYJ2 551 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 FBXL14Q8N1E6 418 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF525Q8N782 197 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 VANGL1Q8TAA9 524 aaPredicted RBP10.84□□□□□ -0.67
PRKDC-207ENST00000536483 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 RIMS3Q9UJD0 308 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 CDC42EP3Q9UKI2 254 aa10.84□□□□□ -0.67
PRKDC-207ENST00000536483 LRRN3E7EW58 273 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 M0R1B8 84 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 NME4O00746 187 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 KRT33AO76009 404 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 IGKV3-15P01624 115 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 MT-ND1P03886 318 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 NQO1P15559 274 aaKnown RBP10.83□□□□□ -0.68
PRKDC-207ENST00000536483 FABP6P51161 128 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 VLDLRP98155 873 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 KRT72Q14CN4 511 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 FXNQ16595 210 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 SLC46A3Q7Z3Q1 461 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 FITM2Q8N6M3 262 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 OR6X1Q8NH79 312 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 ALKBH3Q96Q83 286 aaPredicted RBP10.83□□□□□ -0.68
PRKDC-207ENST00000536483 RAB3IPQ96QF0 476 aaPredicted RBP10.83□□□□□ -0.68
PRKDC-207ENST00000536483 SEPHS2Q99611 448 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 C1QTNF6Q9BXI9 259 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 NANSQ9NR45 359 aa10.83□□□□□ -0.68
PRKDC-207ENST00000536483 SLC35F4A4IF30 521 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 NPIPB13A6NJU9 1138 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF99A8MXY4 864 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-207ENST00000536483 CENPBD1B2RD01 187 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 NPIPB4C9JG80 1138 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 UBOX5O94941 541 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 CH25HO95992 272 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 CBR1P16152 277 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 SLC25A16P16260 332 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 GSK3BP49841 420 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 SLC7A2P52569 658 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
PRKDC-207ENST00000536483 POU3F1Q03052 451 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-207ENST00000536483 PIN1Q13526 163 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms