RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	HSD17B1	P14061	328 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	HNF1A	P20823	631 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	TACR3	P29371	465 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	SERPINF1	P36955	418 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	KHK	P50053	298 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	ERF	P50548	548 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	LIPE	Q05469	1076 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	SLC34A1	Q06495	639 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	EFNB3	Q15768	340 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZFP1	Q6P2D0	407 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	DHFR2	Q86XF0	187 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	FAM156A	Q8NDB6	213 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	FOXN4	Q96NZ1	517 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	SORCS2	Q96PQ0	1159 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	ECSIT	Q9BQ95	431 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	KATNB1	Q9BVA0	655 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	S100A14	Q9HCY8	104 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	CMTM6	Q9NX76	183 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	STX18	Q9P2W9	335 aa	Known RBP	10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	CRNN	Q9UBG3	495 aa	Predicted RBP	10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	MOK	Q9UQ07	419 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	HIF3A	Q9Y2N7	669 aa		10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	ANK3	Q12955	4377 aa	Known RBP	10.05	□□□□□ -0.8
CTNND1-238	ENST00000534647	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	OR6C65	A6NJZ3	312 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	LIPT2	A6NK58	231 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	AQP7P3	A6NL99	342 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	CLDN24	A6NM45	220 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	PRSS47	A8MTI9	375 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	EVPLL	A8MZ36	301 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	AP3D1	O14617	1153 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	GSTA4	O15217	222 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	LY6H	O94772	140 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	VAMP5	O95183	116 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	CPSF4	O95639	269 aa	Known RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	GPI	P06744	558 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	APEH	P13798	732 aa	Known RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	ANPEP	P15144	967 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZNF23	P17027	643 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	CCNA2	P20248	432 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	RPS4Y1	P22090	263 aa	Known RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	GIF	P27352	417 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	MSX2	P35548	267 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	GSK3B	P49841	420 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	SNRPD2	P62316	118 aa	Known RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	MS4A2	Q01362	244 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	GNA13	Q14344	377 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	GGTLC2	Q14390	218 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	RABL3	Q5HYI8	236 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	C9orf135	Q5VTT2	229 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	LIPN	Q5VXI9	398 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	KLHL24	Q6TFL4	600 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	DLEU7	Q6UYE1	221 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	LRRC74B	Q6ZQY2	392 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	AAED1	Q7RTV5	226 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZNF440	Q8IYI8	595 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	OR9K2	Q8NGE7	335 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	FBXO17	Q96EF6	278 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	CCDC115	Q96NT0	180 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	ANKRD27	Q96NW4	1050 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	SLC38A2	Q96QD8	506 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	PANX1	Q96RD7	426 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	SLC38A1	Q9H2H9	487 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	PLK3	Q9H4B4	646 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	CA10	Q9NS85	328 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	SLAMF8	Q9P0V8	285 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	BTNL2	Q9UIR0	455 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	SNX13	Q9Y5W8	968 aa		10.04	□□□□□ -0.8
CTNND1-238	ENST00000534647	IGHV1-18	A0A0C4DH31	117 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	IGHV4-61	A0A0C4DH41	118 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZC3H12D	A2A288	527 aa	Known RBP	10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ACOT8	O14734	319 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	IGLV1-44	P01699	117 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	CRYAA	P02489	173 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	UQCRB	P14927	111 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	PPOX	P50336	477 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ANXA11	P50995	505 aa	Known RBP	10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	P2RY4	P51582	365 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	HPCA	P84074	193 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	EPS8	Q12929	822 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ADIPOQ	Q15848	244 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZSWIM7	Q19AV6	140 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	TBRG1	Q3YBR2	411 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	GPAT3	Q53EU6	434 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	HIKESHI	Q53FT3	197 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	RUNDC3A	Q59EK9	446 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	LRIF1	Q5T3J3	769 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ARFGEF3	Q5TH69	2177 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	MALRD1	Q5VYJ5	2156 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ANKRD16	Q6P6B7	361 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZNF621	Q6ZSS3	439 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ANKRD46	Q86W74	232 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	TMEM99	Q8N816	258 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	OR4F15	Q8NGB8	312 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	OR1K1	Q8NGR3	316 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	PYDC1	Q8WXC3	89 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms