RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FUZQ9BT04 418 aa11.73□□□□□ -0.53
CMTM1-219ENST00000533953 NELFAQ9H3P2 528 aa11.73□□□□□ -0.53
CMTM1-219ENST00000533953 INIPQ9NRY2 104 aa11.73□□□□□ -0.53
CMTM1-219ENST00000533953 CCM2LQ9NUG4 571 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-219ENST00000533953 A0A1W2PRQ8 180 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 ZNF503-AS2A6NEH8 195 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 M0R1B8 84 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 GADD45GO95257 159 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 BCL10O95999 233 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 FABP3P05413 133 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 RRM2P31350 389 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 IST1P53990 364 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 SPOCK1Q08629 439 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 TOP3AQ13472 1001 aaPredicted RBP11.72□□□□□ -0.53
CMTM1-219ENST00000533953 DGCR6Q14129 220 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 ACKR1Q16570 336 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 OR7E24Q6IFN5 339 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 LCN8Q6JVE9 175 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 PGM2L1Q6PCE3 622 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 LRFN4Q6PJG9 635 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 ZNF704Q6ZNC4 412 aaPredicted RBP11.72□□□□□ -0.53
CMTM1-219ENST00000533953 RRM2BQ7LG56 351 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 OAFQ86UD1 273 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 RNF113BQ8IZP6 322 aaKnown RBP11.72□□□□□ -0.53
CMTM1-219ENST00000533953 CLDN22Q8N7P3 220 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 LRRC75AQ8NAA5 344 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 SYT14Q8NB59 555 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 OR4K5Q8NGD3 323 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 MCUR1Q96AQ8 359 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 DHRS1Q96LJ7 313 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 ZNF347Q96SE7 839 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 CADM1Q9BY67 442 aaKnown RBP11.72□□□□□ -0.53
CMTM1-219ENST00000533953 IL1RAPQ9NPH3 570 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 VNN3Q9NY84 501 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 IL20RAQ9UHF4 553 aa11.72□□□□□ -0.53
CMTM1-219ENST00000533953 SH3PXD2BA1X283 911 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 RPL36A-HNRNPH2H7BZ11 118 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 GSC2O15499 205 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 AKAP8O43823 692 aaKnown RBP11.71□□□□□ -0.53
CMTM1-219ENST00000533953 IGF2P01344 180 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 TSPAN19P0C672 248 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 OMPP47874 163 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 CSNK1A1P48729 337 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 CTXN1P60606 82 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ALG10Q5BKT4 473 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ADAM5Q6NVV9 412 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 TMPRSS11FQ6ZWK6 438 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ABHD12BQ7Z5M8 362 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ZER1Q7Z7L7 766 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 P2RY8Q86VZ1 359 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 KBTBD8Q8NFY9 601 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ASB10Q8WXI3 467 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 HDAC2Q92769 488 aaKnown RBP11.71□□□□□ -0.53
CMTM1-219ENST00000533953 TMEM54Q969K7 222 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ASB9Q96DX5 294 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ULBP2Q9BZM5 246 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 SEC61A2Q9H9S3 476 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 GLTPQ9NZD2 209 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ST6GALNAC2Q9UJ37 374 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 ZNF346Q9UL40 294 aaKnown RBP11.71□□□□□ -0.53
CMTM1-219ENST00000533953 HIF3AQ9Y2N7 669 aa11.71□□□□□ -0.53
CMTM1-219ENST00000533953 CREBBPQ92793 2442 aa11.71□□□□□ -0.54
CMTM1-219ENST00000533953 CSMD1Q96PZ7 3565 aa11.71□□□□□ -0.54
CMTM1-219ENST00000533953 ROS1P08922 2347 aa11.71□□□□□ -0.54
CMTM1-219ENST00000533953 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 A0A1W2PRG6 482 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 MCIDASD6RGH6 385 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 PTP4A3O75365 173 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 TRMUO75648 421 aaKnown RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 DNAJC8O75937 253 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 CD3EP07766 207 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 QDPRP09417 244 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 PATE4P0C8F1 98 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 PGA4P0DJD7 388 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 PGA3P0DJD8 388 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ITGA2P17301 1181 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 LIMS1P48059 325 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 PRPS1P60891 318 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ERVK-25P63136 954 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 DBPQ10586 325 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 DNAL1Q4LDG9 190 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ARMC4Q5T2S8 1044 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ANKRD16Q6P6B7 361 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 KLHL24Q6TFL4 600 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 CDK20Q8IZL9 346 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 C1orf162Q8NEQ5 155 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 AKAP1Q92667 903 aaKnown RBP eCLIP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ZNF566Q969W8 418 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 SLC25A44Q96H78 314 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 LRR1Q96L50 414 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ALPK1Q96QP1 1244 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ANKRD19PQ9H560 264 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms