RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 LEXMQ3ZCV2 418 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 MANEAQ5SRI9 462 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 OR4N5Q8IXE1 308 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TCTEX1D1Q8N7M0 179 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 APH1BQ8WW43 257 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 UCN3Q969E3 161 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ISOC2Q96AB3 205 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 GNB4Q9HAV0 340 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ZNF355PQ9NSJ1 428 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SOCS5O75159 536 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ACTL6BO94805 426 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ITGB2P05107 769 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 STAG3L3P0CL85 134 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 NAGAP17050 411 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RABIFP47224 123 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SLC6A12P48065 614 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 HSD11B2P80365 405 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 STEAP1BQ6NZ63 245 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SPRED1Q7Z699 444 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ZNF573Q86YE8 665 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 OR8U1Q8NH10 309 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 BLNKQ8WV28 456 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TRMT2BQ96GJ1 504 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ALX4Q9H161 411 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SRA1Q9HD15 236 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 STEAP1Q9UHE8 339 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 MYH3P11055 1940 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SLC22A20A6NK97 555 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 TGM5O43548 720 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 EGFP01133 1207 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 PTHP01270 115 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 ACRV1P26436 265 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 WDR5P61964 334 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 P2RY14Q15391 338 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 NR0B2Q15466 257 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 FFAR4Q5NUL3 377 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 SYT6Q5T7P8 510 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 LRRC25Q8N386 305 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 RCBTB1Q8NDN9 531 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 ASB11Q8WXH4 323 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 NANOS1Q8WY41 292 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 THAP4Q8WY91 577 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 TOE1Q96GM8 510 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 CIB3Q96Q77 187 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 ZNF382Q96SR6 550 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 CDH20Q9HBT6 801 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 CLEC4EQ9ULY5 219 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 LY75O60449 1722 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 LOC390937A0A1W2PQ73 354 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 PQLC2LA1A4F0 135 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 SERPINA5P05154 406 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 FHITP49789 147 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 BPIFB3P59826 476 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 RAP1BP61224 184 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 PCK2Q16822 640 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 ZNF528Q3MIS6 628 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 Q6ZRG5 221 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 HSD17B13Q7Z5P4 300 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 CATSPERDQ86XM0 798 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 FUNDC1Q8IVP5 155 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 SLC5A8Q8N695 610 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 OR9K2Q8NGE7 335 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 OR2AE1Q8NHA4 323 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 FNDC9Q8TBE3 224 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 TOMM40LQ969M1 308 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 SORCS2Q96PQ0 1159 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 CFHR5Q9BXR6 569 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 NMNAT2Q9BZQ4 307 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 LAMP3Q9UQV4 416 aa6.46□□□□□ -1.37
TGFBR3-210ENST00000533089 FBLL1A6NHQ2 334 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 ZNF736B4DX44 427 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 LDLRAD4O15165 306 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 OR7C2O60412 319 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 HOXB5P09067 269 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 CSF3P09919 207 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 MGMTP16455 207 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 DTYMKP23919 212 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 COL5A3P25940 1745 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 KIR2DL3P43628 341 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 TBPL1P62380 186 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 HOXC5Q00444 222 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 HNF4GQ14541 408 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 PAFAH1B3Q15102 231 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 COL24A1Q17RW2 1714 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 ZNF66Q6ZN08 573 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 Q6ZTK2 550 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 GID4Q8IVV7 300 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 OR1J1Q8NGS3 322 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 BCL2L2Q92843 193 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 ZNF442Q9H7R0 627 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 SIX2Q9NPC8 291 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 UBR3Q6ZT12 1888 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 A0A1W2PNV4 684 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 ANKRD28O15084 1053 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 APBB3O95704 486 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 MTNR1AP48039 350 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 SHC2P98077 582 aa6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 ELAVL3Q14576 367 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-210ENST00000533089 DEGS2Q6QHC5 323 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms