RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 OR5H1A6NKK0 313 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 M0R3G1 203 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 CIB2O75838 187 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 HOXC12P31275 282 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 OMPP47874 163 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 CSNK1A1P48729 337 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 FOXG1P55316 489 aaPredicted RBP18.3■□□□□ 0.52
CCS-207ENST00000531990 SH3BGRP55822 239 aaPredicted RBP18.3■□□□□ 0.52
CCS-207ENST00000531990 PRPS1P60891 318 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 ROR2Q01974 943 aaKnown RBP18.3■□□□□ 0.52
CCS-207ENST00000531990 LGALS3BPQ08380 585 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 TAB1Q15750 504 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 GABRA6Q16445 453 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 ZBED5Q49AG3 693 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 TIMM23BQ5SRD1 257 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 C1orf146Q5VVC0 180 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 ALKBH2Q6NS38 261 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 C20orf196Q8IYI0 205 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 LINC00471Q8N535 108 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 ZNF566Q969W8 418 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 SLC25A44Q96H78 314 aaPredicted RBP18.3■□□□□ 0.52
CCS-207ENST00000531990 RSRC1Q96IZ7 334 aaKnown RBP18.3■□□□□ 0.52
CCS-207ENST00000531990 LYVE1Q9Y5Y7 322 aa18.3■□□□□ 0.52
CCS-207ENST00000531990 TCRBV3S1A0A5B6 114 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 RPL36A-HNRNPH2H7BZ11 118 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 CDC42EP2O14613 210 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 THBDP07204 575 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 CDH2P19022 906 aaPredicted RBP18.29■□□□□ 0.52
CCS-207ENST00000531990 RPL4P36578 427 aaKnown RBP18.29■□□□□ 0.52
CCS-207ENST00000531990 HMGA2P52926 109 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 MELKQ14680 651 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 ACKR1Q16570 336 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 C22orf34Q6ZV56 151 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 C17orf78Q8N4C9 275 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 MUS81Q96NY9 551 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 CRLF2Q9HC73 371 aa18.29■□□□□ 0.52
CCS-207ENST00000531990 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.29■□□□□ 0.52
CCS-207ENST00000531990 SAMHD1Q9Y3Z3 626 aaKnown RBP18.29■□□□□ 0.52
CCS-207ENST00000531990 UNC119BA6NIH7 251 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 NPIPB13A6NJU9 1138 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 NPIPB4C9JG80 1138 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 GNGT2O14610 69 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 CTAG2O75638 210 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 CST1P01037 141 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 IGHG1P01857 330 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 LIMS1P48059 325 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 CLRN1P58418 232 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 CTXN1P60606 82 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 GK3PQ14409 553 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 PPA1Q15181 289 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 BEX5Q5H9J7 111 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 KLHL24Q6TFL4 600 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 ASRGL1Q7L266 308 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 ASB10Q8WXI3 467 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 POLDIP3Q9BY77 421 aaKnown RBP18.28■□□□□ 0.52
CCS-207ENST00000531990 ULBP2Q9BZM5 246 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 TXNIPQ9H3M7 391 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 GPR35Q9HC97 309 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 RASSF1Q9NS23 344 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 ABCA12Q86UK0 2595 aa18.28■□□□□ 0.52
CCS-207ENST00000531990 ALPK2Q86TB3 2170 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 CCNB2O95067 398 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 NDUFB2O95178 105 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 ERFP50548 548 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 TOP3AQ13472 1001 aaPredicted RBP18.27■□□□□ 0.52
CCS-207ENST00000531990 CEACAM16Q2WEN9 425 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 C1QTNF12Q5T7M4 302 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 LINGO2Q7L985 606 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 ZER1Q7Z7L7 766 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 OR1K1Q8NGR3 316 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 GNPDA2Q8TDQ7 276 aa18.27■□□□□ 0.52
CCS-207ENST00000531990 CLEC4MQ9H2X3 399 aaPredicted RBP18.27■□□□□ 0.52
CCS-207ENST00000531990 CCM2LQ9NUG4 571 aaPredicted RBP18.27■□□□□ 0.52
CCS-207ENST00000531990 NAV2Q8IVL1 2488 aa18.27■□□□□ 0.51
CCS-207ENST00000531990 FAM221AA4D161 298 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 CENPBD1B2RD01 187 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 FKBP6O75344 327 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 NR2C1P13056 603 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 FPR3P25089 353 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 RPL27P61353 136 aaKnown RBP18.26■□□□□ 0.51
CCS-207ENST00000531990 FHL1Q13642 323 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 PHYHD1Q5SRE7 291 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 FAM205BPQ63HN1 556 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 C1orf94Q6P1W5 598 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 ANKRD16Q6P6B7 361 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 IGFN1Q86VF2 1251 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 LRRC75AQ8NAA5 344 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 OR52N5Q8NH56 324 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 TMEM54Q969K7 222 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 PIK3IP1Q96FE7 263 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 SLC17A5Q9NRA2 495 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 GLTPQ9NZD2 209 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 SIGLEC7Q9Y286 467 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 POFUT2Q9Y2G5 429 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 AMDHD2Q9Y303 409 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 U3KQV3 271 aa18.26■□□□□ 0.51
CCS-207ENST00000531990 DEFB108AA8MXU0 73 aa18.25■□□□□ 0.51
CCS-207ENST00000531990 ZNF99A8MXY4 864 aaPredicted RBP18.25■□□□□ 0.51
CCS-207ENST00000531990 KLF4O43474 513 aa18.25■□□□□ 0.51
CCS-207ENST00000531990 PTP4A3O75365 173 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms