RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 BPIFA2Q96DR5 249 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 TXNDC15Q96J42 360 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 NSMCE2Q96MF7 247 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 FUZQ9BT04 418 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 NELFAQ9H3P2 528 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 GPR35Q9HC97 309 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 TAS2R1Q9NYW7 299 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 NPAP1Q9NZP6 1156 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 CRNNQ9UBG3 495 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 PRPF19Q9UMS4 504 aaKnown RBP9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 RNF115Q9Y4L5 304 aa9.47□□□□□ -0.89
GPATCH4-216ENST00000531900 ZNF726A6NNF4 738 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ZNF99A8MXY4 864 aaPredicted RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 KPNA4O00629 521 aaPredicted RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ARHGEF9O43307 516 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 KRT33AO76009 404 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 WNT11O96014 354 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 CD3EP07766 207 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 IFNGR1P15260 489 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 PAX1P15863 534 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ITGA2P17301 1181 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 AHCYP23526 432 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 PTAFRP25105 342 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ZNF133P52736 654 aaPredicted RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 PRPS1P60891 318 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 LSM11P83369 360 aaKnown RBP eCLIP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 VLDLRP98155 873 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ROR2Q01974 943 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 RPL18Q07020 188 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 BSPH1Q075Z2 132 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 LGALS3BPQ08380 585 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 TRIM25Q14258 630 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 TAF11Q15544 211 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 TBRG1Q3YBR2 411 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 SHEQ5VZ18 495 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 HMBOX1Q6NT76 420 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 KLHL17Q6TDP4 642 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 TMEM108Q6UXF1 575 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 SLC35D2Q76EJ3 337 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 NANOGNBQ7Z5D8 188 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 WDFY1Q8IWB7 410 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 NRMQ8IXM6 262 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 GPR137CQ8N3F9 429 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 TMEM54Q969K7 222 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 PIGTQ969N2 578 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 SLC25A44Q96H78 314 aaPredicted RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ALKBH3Q96Q83 286 aaPredicted RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 MRPL13Q9BYD1 178 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 GRIP2Q9C0E4 1043 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 CRLF2Q9HC73 371 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 IL1RAPQ9NPH3 570 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 MED29Q9NX70 200 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 STX18Q9P2W9 335 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 MGAT4BQ9UQ53 548 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 ZANQ9Y493 2812 aa9.46□□□□□ -0.9
GPATCH4-216ENST00000531900 BLOC1S5-TXNDC5H3BN57 136 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 HS3ST1O14792 307 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 RNF13O43567 381 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 MGRN1O60291 552 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 PLAUP00749 431 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 IGKV3-15P01624 115 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 IGLV1-44P01699 117 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 IGHMP01871 453 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 H1F0P07305 194 aaKnown RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 DANCRP0C864 163 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 PGA4P0DJD7 388 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 PGA3P0DJD8 388 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 UMPSP11172 480 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 IFI30P13284 250 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 TCN1P20061 433 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 PTNP21246 168 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 CD40P25942 277 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 HOXC12P31275 282 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 MSX2P35548 267 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 MAGEA2P43356 314 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 YAP1P46937 504 aaKnown RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 HMGA2P52926 109 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 NKX6-1P78426 367 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 MXRA7P84157 204 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 CEACAM16Q2WEN9 425 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 NRN1LQ496H8 165 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 PHYHD1Q5SRE7 291 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 ARMC4Q5T2S8 1044 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 LCN8Q6JVE9 175 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 RINLQ6ZS11 566 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 HDDC2Q7Z4H3 204 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 LRRC75A-AS1Q8N1F1 130 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 LRRC75AQ8NAA5 344 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 OR52N5Q8NH56 324 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 EMC6Q9BV81 110 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 B3GAT2Q9NPZ5 323 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 GLTPQ9NZD2 209 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 RHCGQ9UBD6 479 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 FAM32AQ9Y421 112 aaKnown RBP9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 ZFHX3Q15911 3703 aa9.45□□□□□ -0.9
GPATCH4-216ENST00000531900 ARFGEF3Q5TH69 2177 aa9.44□□□□□ -0.9
GPATCH4-216ENST00000531900 A0A1W2PRG6 482 aa9.44□□□□□ -0.9
GPATCH4-216ENST00000531900 TCRBV5S2A0A599 114 aa9.44□□□□□ -0.9
GPATCH4-216ENST00000531900 SHISA9B4DS77 424 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms