RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 EIF2B5Q13144 721 aaKnown RBP17.52■□□□□ 0.39
VPS28-213ENST00000530983 ALG10Q5BKT4 473 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 WBP2NLQ6ICG8 309 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 ARMC6Q6NXE6 501 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 LRRTM1Q86UE6 522 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 ADGRG3Q86Y34 549 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 DND1Q8IYX4 353 aaKnown RBP17.52■□□□□ 0.39
VPS28-213ENST00000530983 OR6V1Q8N148 313 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 C10orf53Q8N6V4 93 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 LIPHQ8WWY8 451 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 MMP25Q9NPA2 562 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 CA10Q9NS85 328 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 TAS2R10Q9NYW0 307 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 FBXL3Q9UKT7 428 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 MOKQ9UQ07 419 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 PCDHGA5Q9Y5G8 931 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 TMEM131Q92545 1883 aa17.52■□□□□ 0.39
VPS28-213ENST00000530983 TRBV5-5A0A0J9YX44 114 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 A0A1B0GTH9 108 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 TSPAN4O14817 238 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 F13BP05160 661 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 TMIGD3P0DMS9 266 aaPredicted RBP17.51■□□□□ 0.39
VPS28-213ENST00000530983 APEHP13798 732 aaKnown RBP17.51■□□□□ 0.39
VPS28-213ENST00000530983 RABIFP47224 123 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 TAS2R20P59543 309 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 CTXN1P60606 82 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 MRPS10P82664 201 aaKnown RBP17.51■□□□□ 0.39
VPS28-213ENST00000530983 EGR4Q05215 589 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 C1orf61Q13536 156 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 FNDC7Q5VTL7 733 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 CBLN3Q6UW01 205 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 CDC20BQ86Y33 519 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 ZNF440Q8IYI8 595 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 ZNF524Q96C55 264 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 ADAD1Q96M93 576 aaKnown RBP17.51■□□□□ 0.39
VPS28-213ENST00000530983 CHIAQ9BZP6 476 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 SRA1Q9HD15 236 aaKnown RBP17.51■□□□□ 0.39
VPS28-213ENST00000530983 PIPOXQ9P0Z9 390 aa17.51■□□□□ 0.39
VPS28-213ENST00000530983 IGF2P01344 180 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 ASAH2BP0C7U1 165 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 PNMTP11086 282 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 MST1P26927 711 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 MAPK3P27361 379 aaPredicted RBP17.5■□□□□ 0.39
VPS28-213ENST00000530983 LTBQ06643 244 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 HYAL1Q12794 435 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 BAMBIQ13145 260 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 TCTE1Q5JU00 501 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 NSMAFQ92636 917 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 SLITRK2Q9H156 845 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 H7C1C5 153 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 ACOT7O00154 380 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 CLDN4O14493 209 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 SEMA4FO95754 770 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 CPN1P15169 458 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 MNDAP41218 407 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 TSPAN5P62079 268 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 LCN6P62502 163 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 PLA2G7Q13093 441 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 SKP2Q13309 424 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 FAM122CQ6P4D5 195 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 MED25Q71SY5 747 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 RBPMSQ93062 196 aaKnown RBP17.5■□□□□ 0.39
VPS28-213ENST00000530983 CCDC74AQ96AQ1 378 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 TOE1Q96GM8 510 aaKnown RBP17.5■□□□□ 0.39
VPS28-213ENST00000530983 CCNL2Q96S94 520 aaPredicted RBP17.5■□□□□ 0.39
VPS28-213ENST00000530983 LPAR4Q99677 370 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 MGAT4CQ9UBM8 478 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 ETV7Q9Y603 341 aa17.5■□□□□ 0.39
VPS28-213ENST00000530983 TRAV8-7A0A075B6U6 113 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 TCRBV21S2A2A0A5A6 115 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 TVP23AA6NH52 213 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 IGHV4-34P06331 123 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 ANXA7P20073 488 aaKnown RBP17.49■□□□□ 0.39
VPS28-213ENST00000530983 CCR4P51679 360 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 DNM1P46Q6ZS02 220 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 SPICQ8N5J4 248 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 UXS1Q8NBZ7 420 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 THEM6Q8WUY1 208 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 UTP23Q9BRU9 249 aaKnown RBP17.49■□□□□ 0.39
VPS28-213ENST00000530983 TAS2R5Q9NYW4 299 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 SLC6A5Q9Y345 797 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 EYSQ5T1H1 3165 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 M0R233 179 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 TXNDC12O95881 172 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 IFNA16P05015 189 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 IFNGR1P15260 489 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 GABRG2P18507 467 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 RAB14P61106 215 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 CBFBQ13951 182 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 MESTQ5EB52 335 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 TMPRSS12Q86WS5 348 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 METTL27Q8N6F8 245 aaPredicted RBP17.49■□□□□ 0.39
VPS28-213ENST00000530983 OR10AC1Q8NH08 325 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 WBP1Q96G27 269 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 ZNF578Q96N58 590 aaPredicted RBP17.49■□□□□ 0.39
VPS28-213ENST00000530983 KLHDC3Q9BQ90 382 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 GSX2Q9BZM3 304 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 ZNF69Q9UC07 566 aa17.49■□□□□ 0.39
VPS28-213ENST00000530983 PPIEQ9UNP9 301 aaKnown RBP17.49■□□□□ 0.39
VPS28-213ENST00000530983 BLACEA4D250 179 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms