RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 LRP4O75096 1905 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 MYO3BQ8WXR4 1341 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 GOLGA6L7A0A1B0GV03 622 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 NKX2-6A6NCS4 301 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 C12orf77C9JDV5 145 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 LIN7AO14910 233 aaPredicted RBP2.76□□□□□ -1.97
CTR9-204ENST00000529355 NVLO15381 856 aaKnown RBP2.76□□□□□ -1.97
CTR9-204ENST00000529355 RAMP3O60896 148 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 PALMO75781 387 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 GLP1RP43220 463 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 CSNK1DP48730 415 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 ARRB1P49407 418 aaPredicted RBP2.76□□□□□ -1.97
CTR9-204ENST00000529355 DSTNP60981 165 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 B2MP61769 119 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 ACVR1Q04771 509 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 MICBQ29980 383 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 SMUG1Q53HV7 270 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 TMEM225Q6GV28 225 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 TWF2Q6IBS0 349 aaKnown RBP2.76□□□□□ -1.97
CTR9-204ENST00000529355 OR4F3Q6IEY1 312 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 OR52W1Q6IF63 320 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 FRMPD2BQ6IN97 320 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 LCN12Q6JVE5 192 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 HSDL2Q6YN16 418 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 CENPQQ7L2Z9 268 aaPredicted RBP2.76□□□□□ -1.97
CTR9-204ENST00000529355 ECHDC2Q86YB7 292 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 TBC1D21Q8IYX1 336 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 FAM133AQ8N9E0 248 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 ACOT4Q8N9L9 421 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 MFSD9Q8NBP5 474 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 IPMKQ8NFU5 416 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 TRMT10AQ8TBZ6 339 aaKnown RBP2.76□□□□□ -1.97
CTR9-204ENST00000529355 MAIP1Q8WWC4 291 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 UFD1Q92890 307 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 UBE2E3Q969T4 207 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 STARD4Q96DR4 205 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 CEP170P1Q96L14 293 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 DEFB127Q9H1M4 99 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 SRMSQ9H3Y6 488 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 PSTPIP2Q9H939 334 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 POLE4Q9NR33 117 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 MMP17Q9ULZ9 603 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 COPS3Q9UNS2 423 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 HEBP2Q9Y5Z4 205 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 SLC25A15Q9Y619 301 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 PPIP5K1Q6PFW1 1433 aa2.76□□□□□ -1.97
CTR9-204ENST00000529355 CCNB3Q8WWL7 1395 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 MAP3K19Q56UN5 1328 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 LOC110117498-PIK3R3F6TDL0 507 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 SGK1O00141 431 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 LAD1O00515 517 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 PRKAB2O43741 272 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 SPOPO43791 374 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 NOL3O60936 208 aaKnown RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 SMIM24O75264 130 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 TDGF1P13385 188 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 ABOP16442 354 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 U2AF2P26368 475 aaKnown RBP eCLIP2.75□□□□□ -1.97
CTR9-204ENST00000529355 HOXA9P31269 272 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 TDGF1P3P51864 188 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 GANABQ14697 944 aaKnown RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 SPCS2Q15005 226 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 CFAP157Q5JU67 520 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 PDZK1Q5T2W1 519 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 ZSCAN25Q6NSZ9 544 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 DHDDSQ86SQ9 333 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 ZNF546Q86UE3 836 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 PIANPQ8IYJ0 282 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 DUSP18Q8NEJ0 188 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 OR8K1Q8NGG5 319 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 OR52K1Q8NGK4 314 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 SGK3Q96BR1 496 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 CEP19Q96LK0 163 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 PELOQ9BRX2 385 aaKnown RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 RAB34Q9BZG1 259 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 API5Q9BZZ5 524 aaKnown RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 VCXQ9H320 206 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 CDC42EP4Q9H3Q1 356 aaKnown RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 ZSCAN16Q9H4T2 348 aaPredicted RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 DMAP1Q9NPF5 467 aaPredicted RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 TMCO1Q9UM00 188 aa2.75□□□□□ -1.97
CTR9-204ENST00000529355 RRBP1Q9P2E9 1410 aaKnown RBP2.75□□□□□ -1.97
CTR9-204ENST00000529355 MROH5Q6ZUA9 1318 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 ERICH3Q5RHP9 1530 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 CECR2Q9BXF3 1484 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 ERICH2A1L162 156 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 GOLGA8SH3BPF8 625 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 UBXN8O00124 270 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 AP3B1O00203 1094 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 TRDMT1O14717 391 aaKnown RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 RNF113AO15541 343 aaKnown RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 CD5LO43866 347 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 ICOSLGO75144 302 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 SS18L1O75177 396 aaPredicted RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 SNNO75324 88 aaPredicted RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 IGLV2-23P01705 113 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 S100A9P06702 114 aaKnown RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 CCDC130P13994 396 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 MAGP20916 626 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms