RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SLC35D2Q76EJ3 337 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 NKAIN4Q8IVV8 208 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 LRRC17Q8N6Y2 441 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 OR6N1Q8NGY5 312 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 CMTM5Q96DZ9 223 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 ULBP2Q9BZM5 246 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 NSRP1Q9H0G5 558 aaKnown RBP28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 HEATR1Q9H583 2144 aaKnown RBP28.76■■■□□ 2.2
SSSCA1-205ENST00000527920 NME4O00746 187 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 HEXAP06865 529 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 CECR9P0C854 216 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 ARR3P36575 388 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 SLC7A2P52569 658 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 NAAAQ02083 359 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 CAMK2DQ13557 499 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 DNM1P46Q6ZS02 220 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 NANOGNBQ7Z5D8 188 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 WDFY1Q8IWB7 410 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 TMEM255BQ8WV15 326 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 TMEM239Q8WW34 195 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 LIPHQ8WWY8 451 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 TPD52L3Q96J77 140 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 CACNG6Q9BXT2 260 aa28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 NSD1Q96L73 2696 aaPredicted RBP28.76■■■□□ 2.19
SSSCA1-205ENST00000527920 NIPBLQ6KC79 2804 aaeCLIP28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 HTR3EA5X5Y0 456 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 H7C417 338 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 RNF13O43567 381 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 SHOX2O60902 331 aaPredicted RBP28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 SERPINI2O75830 405 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 CSNK1A1P48729 337 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 UGT2B15P54855 530 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 BIDP55957 195 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 TUBA1BP68363 451 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 TUBA4AP68366 448 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 TUBA1AQ71U36 451 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 PRRC1Q96M27 445 aa28.75■■■□□ 2.19
SSSCA1-205ENST00000527920 SNX3O60493 162 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 UMPSP11172 480 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 BMP4P12644 408 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 PRDX6P30041 224 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 IFNA8P32881 189 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 NUDT2P50583 147 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 TNK1Q13470 666 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 TMEM54Q969K7 222 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 ABCD2Q9UBJ2 740 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 POFUT2Q9Y2G5 429 aa28.74■■■□□ 2.19
SSSCA1-205ENST00000527920 CXCR6O00574 342 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 NDUFS7O75251 213 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 OR7A10O76100 309 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 LSP1P33241 339 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 CHRNB3Q05901 458 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 ST3GAL3Q11203 375 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 CSPG4Q6UVK1 2322 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 OR4F15Q8NGB8 312 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 PFN4Q8NHR9 129 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 SGTBQ96EQ0 304 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 SLC25A44Q96H78 314 aaPredicted RBP28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 GMPR2Q9P2T1 348 aaKnown RBP28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 GDF2Q9UK05 429 aaPredicted RBP28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 A4GNTQ9UNA3 340 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 MED31Q9Y3C7 131 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 TLN2Q9Y4G6 2542 aa28.73■■■□□ 2.19
SSSCA1-205ENST00000527920 NAV3Q8IVL0 2385 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 PDE5AO76074 875 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 FUT1P19526 365 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 DRD4P21917 467 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 ACVR1BP36896 505 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 GSK3BP49841 420 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 ZNF813Q6ZN06 617 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 IL17RDQ8NFM7 739 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 ZNF566Q969W8 418 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 FOXB1Q99853 325 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 DENND2DQ9H6A0 471 aaPredicted RBP28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 B3GNT2Q9NY97 397 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 GLTPQ9NZD2 209 aa28.72■■■□□ 2.19
SSSCA1-205ENST00000527920 ZNF503-AS2A6NEH8 195 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 SMAD7O15105 426 aaKnown RBP28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 GSTA4O15217 222 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 LY6G6DO95868 133 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 IFNW1P05000 195 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 TSPAN19P0C672 248 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 CBLL1Q75N03 491 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 MDP1Q86V88 176 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 NUP37Q8NFH4 326 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 GEMIN6Q8WXD5 167 aaKnown RBP28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 CA10Q9NS85 328 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 C20orf141Q9NUB4 165 aa28.71■■■□□ 2.19
SSSCA1-205ENST00000527920 CENPBD1B2RD01 187 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 ENTPD5O75356 428 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 SEC14L2O76054 403 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 BCL10O95999 233 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 RPL18Q07020 188 aaKnown RBP28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 HDDC2Q7Z4H3 204 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 CPLX4Q7Z7G2 160 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 OFCC1Q8IZS5 231 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 NANOS1Q8WY41 292 aaKnown RBP28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 POM121Q96HA1 1249 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 FAM107BQ9H098 131 aa28.7■■■□□ 2.18
SSSCA1-205ENST00000527920 ZANQ9Y493 2812 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms