RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RASD1Q9Y272 281 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 COA3Q9Y2R0 106 aaPredicted RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 A0A1W2PR77 199 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 PRAMEF27A3QJZ7 478 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 ANKRD30BLA7E2S9 258 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.74□□□□□ -0.217e-6■■■■□ 20.8
USP47-207ENST00000527733 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 ZBTB8AQ96BR9 441 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 FOXRED1Q96CU9 486 aaPredicted RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 CHIAQ9BZP6 476 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 NAA50Q9GZZ1 169 aaKnown RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 A0A087WUJ7 227 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 MPIG6BO95866 241 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 STARP49675 285 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 PPIAP62937 165 aaKnown RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 EBPQ15125 230 aaKnown RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 SARGQ9BW04 601 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 DEFB127Q9H1M4 99 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 TAS2R8Q9NYW2 309 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 ZNF346Q9UL40 294 aaKnown RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 HDGFL3Q9Y3E1 203 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 IFNA21P01568 189 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 FOXF1Q12946 379 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 CTU2Q2VPK5 515 aaKnown RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 NINJ1Q92982 152 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 APH1AQ96BI3 265 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 PAQR5Q9NXK6 330 aaPredicted RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 ALG1L2C9J202 215 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 FOXS1O43638 330 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 HTR3BO95264 441 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 RLN2P04090 185 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 FCGR2AP12318 317 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 THOC7Q6I9Y2 204 aaKnown RBP13.73□□□□□ -0.21
USP47-207ENST00000527733 ADAMTS14Q8WXS8 1223 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 GALNT9Q9HCQ5 603 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 FBXO34Q9NWN3 711 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 CLEC2DQ9UHP7 191 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 TMEM129A0AVI4 362 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 SERPINA7P05543 415 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 CD40LGP29965 261 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 OPRL1P41146 370 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 CD97P48960 835 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 ACTBP60709 375 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 ACTG1P63261 375 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 AIMP2Q13155 320 aaKnown RBP13.73□□□□□ -0.21
USP47-207ENST00000527733 MFAP5Q13361 173 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 CNN3Q15417 329 aaKnown RBP13.73□□□□□ -0.21
USP47-207ENST00000527733 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 C10orf90Q96M02 699 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 DUSP21Q9H596 190 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 A0A0B4J2E0 115 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 A0A1B0GX12 115 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 JUNBP17275 347 aaPredicted RBP13.73□□□□□ -0.21
USP47-207ENST00000527733 GALNSP34059 522 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 PRSS3P35030 304 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
USP47-207ENST00000527733 GJC3Q8NFK1 279 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 RAB33BQ9H082 229 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 CCDC59Q9P031 241 aaKnown RBP13.73□□□□□ -0.21
USP47-207ENST00000527733 ZNF69Q9UC07 566 aa13.73□□□□□ -0.21
USP47-207ENST00000527733 A0A1W2PS29 197 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 KLK10O43240 276 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 SELENOFO60613 162 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 SLC2A10O95528 541 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 AMY2BP19961 511 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 EPHA2P29317 976 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ACER2Q5QJU3 275 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 OR51B6Q9H340 312 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 APMAPQ9HDC9 416 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 PIKFYVEQ9Y2I7 2098 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ACOD1A6NK06 481 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ZNF814B7Z6K7 855 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 CXCL13O43927 109 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 CRTAPO75718 401 aaPredicted RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 IGLV3-19P01714 112 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 SPI1P17947 270 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 DIO1P49895 249 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 RPS25P62851 125 aaKnown RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 SPCS2Q15005 226 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 CDNFQ49AH0 187 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 RNASE10Q5GAN6 216 aaKnown RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 GLB1L2Q8IW92 636 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 OR10G3Q8NGC4 313 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 TMEM106AQ96A25 262 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 NOP16Q9Y3C1 178 aaKnown RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 WDR81Q562E7 1941 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 TRAV6A0A075B6T7 132 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 CLUP10909 449 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 IRF2P14316 349 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 DSCR4P56555 118 aaPredicted RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 SPOCK1Q08629 439 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 NUBPLQ8TB37 319 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 CLDN23Q96B33 292 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 TM4SF19Q96DZ7 209 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ZNF681Q96N22 645 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 TXNIPQ9H3M7 391 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 PILRAQ9UKJ1 303 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms