RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 AKAP7Q9P0M2 348 aaPredicted RBP13.9□□□□□ -0.18
USH1C-207ENST00000527720 FKBP7Q9Y680 259 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 A0A0B4J203 849 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 ACOD1A6NK06 481 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 C1QBP02746 253 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 RAF1P04049 648 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 CALCBP10092 127 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 S100A1P23297 94 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 SLC22A10Q63ZE4 541 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 RHBDD2Q6NTF9 364 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 PRSS58Q8IYP2 241 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 OR6N2Q8NGY6 317 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 GPR119Q8TDV5 335 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 METTL21AQ8WXB1 218 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 THRSPQ92748 146 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 SYT4Q9H2B2 425 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 SLA2Q9H6Q3 261 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 PAQR5Q9NXK6 330 aaPredicted RBP13.89□□□□□ -0.19
USH1C-207ENST00000527720 FRRS1LQ9P0K9 344 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 TMED7Q9Y3B3 224 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 IGLV3-12A0A075B6K2 115 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 TMEM212A6NML5 194 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 H7C1C5 153 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 ARHGEF9O43307 516 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 SUSD5O60279 629 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 DXOO77932 396 aaKnown RBP13.89□□□□□ -0.19
USH1C-207ENST00000527720 RPP14O95059 124 aaKnown RBP13.89□□□□□ -0.19
USH1C-207ENST00000527720 IGHMP01871 453 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 DPP4P27487 766 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 RAG2P55895 527 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 RPL27P61353 136 aaKnown RBP13.89□□□□□ -0.19
USH1C-207ENST00000527720 LCN6P62502 163 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 DGCR2P98153 550 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 EFR3AQ14156 821 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 FAM199XQ6PEV8 388 aaPredicted RBP13.89□□□□□ -0.19
USH1C-207ENST00000527720 CMTM4Q8IZR5 234 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 SIX5Q8N196 739 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 ZFP3Q96NJ6 502 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 BEX2Q9BXY8 128 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 SEMA4CQ9C0C4 833 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 COMMD4Q9H0A8 199 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 TCF7L1Q9HCS4 588 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 ANKRD10Q9NXR5 420 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 TAS2R10Q9NYW0 307 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 CLEC4AQ9UMR7 237 aa13.89□□□□□ -0.19
USH1C-207ENST00000527720 C7orf66A4D0T2 115 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 TVP23AA6NH52 213 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SULT1B1O43704 296 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 AKR7A3O95154 331 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 RAB40ALP0C0E4 278 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 PNLIPP16233 465 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 RCVRNP35243 200 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 SCAND1P57086 179 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SLC26A5P58743 744 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 RASGEF1BQ0VAM2 473 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 MAB21L1Q13394 359 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 C1QTNF12Q5T7M4 302 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 TMEM71Q6P5X7 295 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 STAC2Q6ZMT1 411 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 COX15Q7KZN9 410 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 CDH24Q86UP0 819 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 ADGRG3Q86Y34 549 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 PM20D2Q8IYS1 436 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 OR6S1Q8NH40 331 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 OTOSQ8NHW6 89 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 ZNF519Q8TB69 540 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 RAB40AQ8WXH6 277 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 HSD17B8Q92506 261 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SLC25A18Q9H1K4 315 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 TXNIPQ9H3M7 391 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 PLEKHA1Q9HB21 404 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 MCUBQ9NWR8 336 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 CTSFQ9UBX1 484 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 IKZF2Q9UKS7 526 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 MRPS7Q9Y2R9 242 aaKnown RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 CABIN1Q9Y6J0 2220 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 PRSS37A4D1T9 235 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 FAM47E-STBD1D6RA91 191 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 KHNYNO15037 678 aaKnown RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 SCO2O43819 266 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 OR2T1O43869 369 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 GMFGO60234 142 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 ZNF254O75437 659 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 TPPPO94811 219 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 TCRBP04435 133 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 CD3GP09693 182 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SRP9P49458 86 aaKnown RBP13.88□□□□□ -0.19
USH1C-207ENST00000527720 GZMKP49863 264 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 RNF4P78317 190 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 FAPQ12884 760 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 SQSTM1Q13501 440 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 HES5Q5TA89 166 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 C1orf140Q5VVS0 124 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 FDX2Q6P4F2 183 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
USH1C-207ENST00000527720 LANCL3Q6ZV70 420 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms