RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 SCN4BQ8IWT1 228 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 CFAP52Q8N1V2 620 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 ACBD7Q8N6N7 88 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 DNAAF1Q8NEP3 725 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 OR5D16Q8NGK9 328 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 ZNF596Q8TC21 504 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 C3orf49Q96BT1 292 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 RAB3CQ96E17 227 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 FAHD2AQ96GK7 314 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 IGSF21Q96ID5 467 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 CAPNS2Q96L46 248 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 ZNF607Q96SK3 696 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 NDUFAF3Q9BU61 184 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 PRO1933Q9H354 126 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 MAN2C1Q9NTJ4 1040 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 ACSS1Q9NUB1 689 aaPredicted RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 ASF1BQ9NVP2 202 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 STOX2Q9P2F5 926 aaPredicted RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 PLXNA3P51805 1871 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TTC3P53804 2025 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 PAPPA2Q9BXP8 1791 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TEX13DA0A0J9YY54 714 aaPredicted RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 TBC1D3FA6NER0 549 aaPredicted RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 CASTOR2A6NHX0 329 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 COLCA2A8K830 154 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 PPIHO43447 177 aaKnown RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 SLC25A27O95847 323 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 CH25HO95992 272 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 OR8U8P0C7N1 319 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 ABOP16442 354 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TYMPP19971 482 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 CTSSP25774 331 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 AGTR1P30556 359 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 MNDAP41218 407 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 LUMP51884 338 aaPredicted RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 PMP22Q01453 160 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 SLAQ13239 276 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 SLBPQ14493 270 aaKnown RBP eCLIP6.88□□□□□ -1.31
SOX6-208ENST00000527619 CNN3Q15417 329 aaKnown RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 HENMT1Q5T8I9 393 aaKnown RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 DCAF12L2Q5VW00 463 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TNFAIP8L2Q6P589 184 aaPredicted RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 SLC36A1Q7Z2H8 476 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 MEX3DQ86XN8 651 aaKnown RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 CPOQ8IVL8 374 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 CMTM4Q8IZR5 234 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 APCDD1Q8J025 514 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 SEMA6DQ8NFY4 1073 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 OR51G2Q8NGK0 314 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 LGALS14Q8TCE9 139 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 FCAMRQ8WWV6 532 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 ASB11Q8WXH4 323 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 PHYHIPQ92561 330 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 WNT2BQ93097 391 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TLNRD1Q9H1K6 362 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 SLC27A6Q9Y2P4 619 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 MRPS2Q9Y399 296 aaKnown RBP6.88□□□□□ -1.31
SOX6-208ENST00000527619 PCNTO95613 3336 aa6.88□□□□□ -1.31
SOX6-208ENST00000527619 TBC1D3KA0A087X1G2 549 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 SMIM35A0A1B0GVV1 85 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 TMEM72A0PK05 275 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 CDRT15L2A8MXV6 281 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 F5H5T6 163 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 EREGO14944 169 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 FLRT2O43155 660 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 BCL2L11O43521 198 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 SLC25A12O75746 678 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 FGF19O95750 216 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 F12P00748 615 aaPredicted RBP6.87□□□□□ -1.31
SOX6-208ENST00000527619 IGHV2-5P01817 119 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 METTL15P1P0C7V9 234 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 S100A2P29034 98 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 IFNGR2P38484 337 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 CEBPGP53567 150 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 UBE2G2P60604 165 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 RPS13P62277 151 aaKnown RBP6.87□□□□□ -1.31
SOX6-208ENST00000527619 TUSC3Q13454 348 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 SURF2Q15527 256 aaPredicted RBP6.87□□□□□ -1.31
SOX6-208ENST00000527619 ACSM3Q53FZ2 586 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 DCAF10Q5QP82 559 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 PRAMEF14Q5SWL7 426 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 FAAP20Q6NZ36 180 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 ULK3Q6PHR2 472 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 TMEM92Q6UXU6 159 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 ZNF546Q86UE3 836 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 LSRQ86X29 649 aaPredicted RBP6.87□□□□□ -1.31
SOX6-208ENST00000527619 FOXRED2Q8IWF2 684 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 KCNRGQ8N5I3 272 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 ABHD17AQ96GS6 310 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 ZNF764Q96H86 408 aaPredicted RBP6.87□□□□□ -1.31
SOX6-208ENST00000527619 CNTNAP3BQ96NU0 1288 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 PAAF1Q9BRP4 392 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 SEC11CQ9BY50 192 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 TMEM185BQ9H7F4 350 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 CXorf36Q9H7Y0 433 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 MRPL17Q9NRX2 175 aaKnown RBP6.87□□□□□ -1.31
SOX6-208ENST00000527619 TRPC4Q9UBN4 977 aa6.87□□□□□ -1.31
SOX6-208ENST00000527619 LHX6Q9UPM6 363 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms