RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 LMAN2LQ9H0V9 348 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 CXXC1Q9P0U4 656 aaPredicted RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 NDRG3Q9UGV2 375 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 HIF3AQ9Y2N7 669 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 IDSB3KWA1 339 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 SIGLEC6O43699 453 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 KAT7O95251 611 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 PRSS3P35030 304 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 RPL4P36578 427 aaKnown RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 SNRPNP63162 240 aaKnown RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 CST6Q15828 149 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 NKAIN2Q5VXU1 208 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 SHEQ5VZ18 495 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 FAM166AQ6J272 317 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 FAM122BQ7Z309 247 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 TMPRSS12Q86WS5 348 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 LRRC75AQ8NAA5 344 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 ATOH1Q92858 354 aaPredicted RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 EDEM2Q9BV94 578 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 TSPAN10Q9H1Z9 355 aaPredicted RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 PIGMQ9H3S5 423 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 TRPV4Q9HBA0 871 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 GPN3Q9UHW5 284 aaPredicted RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 MRPS23Q9Y3D9 190 aaKnown RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 ADAM18Q9Y3Q7 739 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 A0A0A6YYH2 397 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 A6NJ64 397 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 TMEM200CA6NKL6 621 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 POM121CA8CG34 1229 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 LATO43561 262 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 CDC40O60508 579 aaKnown RBP eCLIP7.28□□□□□ -1.24
BDNF-213ENST00000525950 RASGRP1O95267 797 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 SIX6O95475 246 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 RLN2P04090 185 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 TAS2R19P59542 299 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 PSG6Q00889 435 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 COL9A2Q14055 689 aaPredicted RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 LY6G6FQ5SQ64 297 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 STEAP1BQ6NZ63 245 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 MAMSTRQ6ZN01 415 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 C12orf45Q8N5I9 185 aaPredicted RBP7.28□□□□□ -1.24
BDNF-213ENST00000525950 OR4E2Q8NGC2 313 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 OR6K6Q8NGW6 343 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 OR2G2Q8NGZ5 317 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 HMGB4Q8WW32 186 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 SMARCD2Q92925 531 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 POTEKPQ9BYX7 375 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 SEMA4CQ9C0C4 833 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 COMMD4Q9H0A8 199 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 TMEM14AQ9Y6G1 99 aa7.28□□□□□ -1.24
BDNF-213ENST00000525950 PAK4O96013 591 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 WNT11O96014 354 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 RLN1P04808 185 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 GP1BAP07359 652 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CD14P08571 375 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CT62P0C5K7 136 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 TMIGD3P0DMS9 266 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 PTHLHP12272 177 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 GTF2F2P13984 249 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CSF2RAP15509 400 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 S1PR1P21453 382 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CNR1P21554 472 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 MPZP25189 248 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 HOXA1P49639 335 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 PDGFRLQ15198 375 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 ZNHIT3Q15649 155 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 CCDC157Q569K6 752 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 JMJD6Q6NYC1 403 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 ATRAIDQ6UW56 229 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 ZNF546Q86UE3 836 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 OR10K1Q8NGX5 313 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 ANKRD9Q96BM1 317 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 ZNF707Q96C28 371 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 LRRC46Q96FV0 321 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 Q96M85 177 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 ADAD1Q96M93 576 aaKnown RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 APOOQ9BUR5 198 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 OBP2AQ9NY56 170 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 TNFSF18Q9UNG2 199 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 BRCA2P51587 3418 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 LOC100289279A0A1B0GTE1 492 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 OTOL1A6NHN0 477 aaPredicted RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 NUDT19A8MXV4 375 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 SLC17A2O00624 439 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 BCL2L11O43521 198 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 FOXS1O43638 330 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 DOK2O60496 412 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CTSVO60911 334 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 APOC3P02656 99 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 SDHAP31040 664 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 RORAP35398 523 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 CDKN2AP42771 156 aaKnown RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 SORDQ00796 357 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 EXOSC7Q15024 291 aaKnown RBP7.27□□□□□ -1.25
BDNF-213ENST00000525950 ZMYND11Q15326 602 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 GLT8D1Q68CQ7 371 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 LEG1Q6P5S2 330 aa7.27□□□□□ -1.25
BDNF-213ENST00000525950 FIGLAQ6QHK4 219 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms