RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 MT-ND1P03886 318 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 SEMG1P04279 462 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 CD40P25942 277 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 GRPRP30550 384 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 KRTAP1-1Q07627 177 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 TRAM2Q15035 370 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 IQCCQ4KMZ1 466 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 CASP12Q6UXS9 341 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 B3GLCTQ6Y288 498 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 AAED1Q7RTV5 226 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 DTX2Q86UW9 622 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 RNF113BQ8IZP6 322 aaKnown RBP10.97□□□□□ -0.65
SMCO4-202ENST00000525141 FAM86B1Q8N7N1 296 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 TMEM239Q8WW34 195 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 OXGR1Q96P68 337 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 GRIP2Q9C0E4 1043 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 NMNAT1Q9HAN9 279 aaPredicted RBP10.97□□□□□ -0.65
SMCO4-202ENST00000525141 IL1RAPQ9NPH3 570 aa10.97□□□□□ -0.65
SMCO4-202ENST00000525141 MEPEQ9NQ76 525 aaPredicted RBP10.97□□□□□ -0.65
SMCO4-202ENST00000525141 MRPL39Q9NYK5 338 aaKnown RBP10.97□□□□□ -0.65
SMCO4-202ENST00000525141 J3KTA2 159 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 M0R082 166 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 ACOT8O14734 319 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 UPK3AO75631 287 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 PDE5AO76074 875 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 YAP1P46937 504 aaKnown RBP10.96□□□□□ -0.65
SMCO4-202ENST00000525141 SELENOPP49908 381 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 VLDLRP98155 873 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF74Q16587 644 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 OR7E24Q6IFN5 339 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 C11orf71Q6IPW1 123 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 CYP2R1Q6VVX0 501 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 PIWIL3Q7Z3Z3 882 aaKnown RBP10.96□□□□□ -0.65
SMCO4-202ENST00000525141 WDFY1Q8IWB7 410 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 MAPK1IP1LQ8NDC0 245 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 PIK3C3Q8NEB9 887 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF417Q8TAU3 575 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 TMEM255BQ8WV15 326 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 LIPHQ8WWY8 451 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 MCUR1Q96AQ8 359 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 CLPTM1LQ96KA5 538 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 MOGAT1Q96PD6 335 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF587Q96SQ5 575 aaPredicted RBP10.96□□□□□ -0.65
SMCO4-202ENST00000525141 ASPNQ9BXN1 380 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 SLCO5A1Q9H2Y9 848 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 MMADHCQ9H3L0 296 aaPredicted RBP10.96□□□□□ -0.65
SMCO4-202ENST00000525141 FKRPQ9H9S5 495 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 NANSQ9NR45 359 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 B3GAT1Q9P2W7 334 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 UPB1Q9UBR1 384 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF229Q9UJW7 825 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 MED31Q9Y3C7 131 aa10.96□□□□□ -0.65
SMCO4-202ENST00000525141 JMJD1CQ15652 2540 aa10.96□□□□□ -0.66
SMCO4-202ENST00000525141 ABCA1O95477 2261 aa10.96□□□□□ -0.66
SMCO4-202ENST00000525141 A0A1W2PRQ8 180 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 TCRBV5S2A0A599 114 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 MS4A18H0YCH9 400 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 M0R1B8 84 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 PLPP3O14495 311 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ZNF432O94892 652 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 STAMBPO95630 424 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 CH25HO95992 272 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 HIST1H2ABP04908 130 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ASAH2BP0C7U1 165 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ZNF43P17038 809 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ATP6V1B2P21281 511 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 PTAFRP25105 342 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 MPGP29372 298 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 TTKP33981 857 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ACVR1BP36896 505 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 UGT2B15P54855 530 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 SMIM11AP58511 58 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ZP4Q12836 540 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 PMS2P3Q13401 168 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 DGCR6Q14129 220 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 CLEC12BQ2HXU8 276 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 MST1LQ2TV78 715 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 MS4A18Q3C1V0 323 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 HIKESHIQ53FT3 197 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 HIST3H2AQ7L7L0 130 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 SSX8Q7RTT4 187 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 GPAT4Q86UL3 456 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 C10orf53Q8N6V4 93 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 OR5J2Q8NH18 312 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ACOT11Q8WXI4 607 aaPredicted RBP10.95□□□□□ -0.66
SMCO4-202ENST00000525141 BCL2L2Q92843 193 aaPredicted RBP10.95□□□□□ -0.66
SMCO4-202ENST00000525141 HIST1H2ACQ93077 130 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 ZNF347Q96SE7 839 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 CADM1Q9BY67 442 aaKnown RBP10.95□□□□□ -0.66
SMCO4-202ENST00000525141 MAGIXQ9H6Y5 334 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 RHCGQ9UBD6 479 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 CR1P17927 2039 aa10.95□□□□□ -0.66
SMCO4-202ENST00000525141 YLPM1P49750 1951 aaKnown RBP10.95□□□□□ -0.66
SMCO4-202ENST00000525141 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
SMCO4-202ENST00000525141 A0A087WUU8 490 aa10.94□□□□□ -0.66
SMCO4-202ENST00000525141 AQP12BA6NM10 295 aa10.94□□□□□ -0.66
SMCO4-202ENST00000525141 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
SMCO4-202ENST00000525141 LRRN3E7EW58 273 aa10.94□□□□□ -0.66
SMCO4-202ENST00000525141 KPNA4O00629 521 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms