RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SNAPC1Q16533 368 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 C1QTNF12Q5T7M4 302 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 ARMC3Q5W041 872 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 ATL3Q6DD88 541 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 KRT80Q6KB66 452 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 GALNT10Q86SR1 603 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 CREBRFQ8IUR6 639 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 NIPA2Q8N8Q9 360 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 SDR9C7Q8NEX9 313 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 OR10D3Q8NH80 312 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 TMED6Q8WW62 240 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 ANKRD7Q92527 254 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 VAT1Q99536 393 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 AGPAT1Q99943 283 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 MRPL47Q9HD33 250 aaKnown RBP5.72□□□□□ -1.49
NEDD8-203ENST00000524927 DYNLRB1Q9NP97 96 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 ZNF275Q9NSD4 429 aaPredicted RBP5.72□□□□□ -1.49
NEDD8-203ENST00000524927 KLHL8Q9P2G9 620 aaPredicted RBP5.72□□□□□ -1.49
NEDD8-203ENST00000524927 CFAP45Q9UL16 551 aa5.72□□□□□ -1.49
NEDD8-203ENST00000524927 DOCK11Q5JSL3 2073 aa5.71□□□□□ -1.49
NEDD8-203ENST00000524927 J3QR06 171 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PRMT5O14744 637 aaPredicted RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 MGRN1O60291 552 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 GPR137BO60478 399 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 LHBP01229 141 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 IGFBP1P08833 259 aaPredicted RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PPIAL4GP0DN37 164 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 CDH1P12830 882 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 COL8A2P25067 703 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 IMPA1P29218 277 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 OR3A2P47893 321 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 LIM2P55344 173 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 CD81P60033 236 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 HERVK_113P63132 956 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ERVK-8P63133 956 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PLIN5Q00G26 463 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF154Q13106 437 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 TRAF3Q13114 568 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 UBE2V1Q13404 147 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 GANABQ14697 944 aaKnown RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 HADHQ16836 314 aaKnown RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 DEFB112Q30KQ8 113 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 GLYR1Q49A26 553 aaPredicted RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 TCP11X2Q5H9J9 407 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ANKRD22Q5VYY1 191 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 REP15Q6BDI9 236 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PTRHD1Q6GMV3 140 aaKnown RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PID1Q7Z2X4 250 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 TUSC5Q8IXB3 177 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PRR22Q8IZ63 422 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PARP8Q8N3A8 854 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 RNF10Q8N5U6 811 aaKnown RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF433Q8N7K0 673 aaPredicted RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 RNF128Q8TEB7 428 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 FAM71F1Q96KD3 344 aaPredicted RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 RNF157Q96PX1 679 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ALS2CR12Q96Q35 445 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 APOL2Q9BQE5 337 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 TBCDQ9BTW9 1192 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ERVK-6Q9BXR3 956 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 SLC17A7Q9P2U7 560 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PRODH2Q9UF12 536 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 PURGQ9UJV8 347 aaKnown RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ICAM5Q9UMF0 924 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 ERVK-19Q9WJR5 959 aa5.71□□□□□ -1.5
NEDD8-203ENST00000524927 SOX21Q9Y651 276 aaPredicted RBP5.71□□□□□ -1.5
NEDD8-203ENST00000524927 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF816-ZNF321PA0A0X1KG74 233 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 CCDC162PA2VCL2 907 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 OR51F1A6NGY5 319 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 hCG_2039718K7EN88 272 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 RAD51DO75771 328 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 GUCA1CO95843 209 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 CLPSP04118 112 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 YES1P07947 543 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 CPT2P23786 658 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 RPL4P36578 427 aaKnown RBP5.7□□□□□ -1.5
NEDD8-203ENST00000524927 STXBP1P61764 594 aaKnown RBP5.7□□□□□ -1.5
NEDD8-203ENST00000524927 BST1Q10588 318 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 PPP1R3AQ16821 1122 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 FAM122CQ6P4D5 195 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 C11orf88Q6PI97 169 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 DGAT2L6Q6ZPD8 337 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 PIWIL4Q7Z3Z4 852 aaKnown RBP5.7□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF567Q8N184 647 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 CLIP4Q8N3C7 705 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 TSPAN14Q8NG11 270 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 OR4K17Q8NGC6 315 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 OR52E2Q8NGJ4 325 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 SSMEM1Q8WWF3 244 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 TANKQ92844 425 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 ADIPOR1Q96A54 375 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 VPS33AQ96AX1 596 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 PPWD1Q96BP3 646 aaKnown RBP5.7□□□□□ -1.5
NEDD8-203ENST00000524927 GFI1Q99684 422 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 ASCL2Q99929 193 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 C1QTNF6Q9BXI9 259 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 AICDAQ9GZX7 198 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 MMP28Q9H239 520 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms