RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PTNP21246 168 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 UBE2NP61088 152 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 ADAM8P78325 824 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 SLC25A3Q00325 362 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 CEACAM16Q2WEN9 425 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 CYP4Z1Q86W10 505 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 DEPDC4Q8N2C3 294 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 CCDC197Q8NCU1 140 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 FAM156AQ8NDB6 213 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 KBTBD8Q8NFY9 601 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 ACOT11Q8WXI4 607 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 SLC25A44Q96H78 314 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 TXNDC15Q96J42 360 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 SEPHS2Q99611 448 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 TMUB1Q9BVT8 246 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 DENND2DQ9H6A0 471 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 HIF3AQ9Y2N7 669 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 OVOL3O00110 214 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 RNF13O43567 381 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 ENTPD5O75356 428 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 IGKV3-15P01624 115 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 IGLV1-44P01699 117 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 UMPSP11172 480 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 ZNF83P51522 516 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 TAF11Q15544 211 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 HIKESHIQ53FT3 197 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 DTX2Q86UW9 622 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 PFN4Q8NHR9 129 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 SMAP2Q8WU79 429 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 TMEM54Q969K7 222 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 BPIFA2Q96DR5 249 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 EMC6Q9BV81 110 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 C20orf141Q9NUB4 165 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 CISD1Q9NZ45 108 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 EGFL7Q9UHF1 273 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 ADAM21Q9UKJ8 722 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 SNX13Q9Y5W8 968 aa18.25■□□□□ 0.51
TRAPPC9-215ENST00000524162 A0A1W2PRQ8 180 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 MGRN1O60291 552 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 FOSL1P15407 271 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 NCK1P16333 377 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 RHCEP18577 417 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 CDH2P19022 906 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 CSNK1A1P48729 337 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 SLC9A3P48764 834 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 RPS4XP62701 263 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 NKX6-1P78426 367 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 ARF1P84077 181 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 PRKCDQ05655 676 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 RPL18Q07020 188 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 DGCR6Q14129 220 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 HIST3H3Q16695 136 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 NRN1LQ496H8 165 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 ZNF566Q969W8 418 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 C7orf34Q96L11 122 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 CDRT15Q96T59 188 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 KATNB1Q9BVA0 655 aa18.24■□□□□ 0.51
TRAPPC9-215ENST00000524162 ARFGEF3Q5TH69 2177 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 A0A1W2PR80 420 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 A0A1W2PRG6 482 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 C11orf98E9PRG8 122 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 BLOC1S5-TXNDC5H3BN57 136 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 M0R1B8 84 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 M0R3G1 203 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 BCL10O95999 233 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 CBR1P16152 277 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 ITGA2P17301 1181 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 DAP3P51398 398 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 CDH11P55287 796 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 BIDP55957 195 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 CAMK2DQ13557 499 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 PGGHGQ32M88 737 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 PHYHD1Q5SRE7 291 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 ZNF544Q6NX49 715 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 SLC22A25Q6T423 547 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 TMPRSS11FQ6ZWK6 438 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 PIWIL3Q7Z3Z3 882 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 TSEN54Q7Z6J9 526 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 KRTAP1-3Q8IUG1 177 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 OR6N1Q8NGY5 312 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 ZNF837Q96EG3 531 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 NSL1Q96IY1 281 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 SLC38A2Q96QD8 506 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 DHRS9Q9BPW9 319 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 ULBP2Q9BZM5 246 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 NMNAT1Q9HAN9 279 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 GLTPQ9NZD2 209 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 NDUFAF4Q9P032 175 aa18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 FAM32AQ9Y421 112 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 SETD2Q9BYW2 2564 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-215ENST00000524162 SEMG1P04279 462 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 PGA4P0DJD7 388 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 PGA3P0DJD8 388 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 CALB2P22676 271 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 ARR3P36575 388 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 ZNF133P52736 654 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 ETFDHQ16134 617 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 MBOAT2Q6ZWT7 520 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 DEFB107AQ8IZN7 70 aa18.22■□□□□ 0.51
TRAPPC9-215ENST00000524162 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms