RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GTF2IRD2BQ6EKJ0 949 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 ZNF474Q6S9Z5 364 aaPredicted RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 TFAP2EQ6VUC0 442 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 DPY19L2P2Q6ZN68 376 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 PTCHD4Q6ZW05 846 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 GTF2IRD2Q86UP8 949 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 PARP8Q8N3A8 854 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 IQCF1Q8N6M8 205 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 CNEP1R1Q8N9A8 125 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 ZNF610Q8N9Z0 462 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 OR6K3Q8NGY3 331 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 HDAC2Q92769 488 aaKnown RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 RASD2Q96D21 266 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 DDOQ99489 341 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 SFXN3Q9BWM7 321 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 OPN3Q9H1Y3 402 aaPredicted RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 TXNIPQ9H3M7 391 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 C12orf49Q9H741 205 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 KRCC1Q9NPI7 259 aaPredicted RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 PAPOLBQ9NRJ5 636 aaKnown RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 SLC7A10Q9NS82 523 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 ZNF629Q9UEG4 869 aaPredicted RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 RCE1Q9Y256 329 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 SLC5A6Q9Y289 635 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 POFUT2Q9Y2G5 429 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 NOSIPQ9Y314 301 aaKnown RBP8.74□□□□□ -1.01
CLN8-202ENST00000517514 IER3IP1Q9Y5U9 82 aa8.74□□□□□ -1.01
CLN8-202ENST00000517514 TEX13CA0A0J9YWL9 993 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 H0YHG0 523 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 ARPC3O15145 178 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 TRMUO75648 421 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 SLC2A10O95528 541 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 PGA4P0DJD7 388 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 PGA3P0DJD8 388 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 CD8BP10966 210 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 APEHP13798 732 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 IGFBP5P24593 272 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 SLC6A6P31641 620 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 OPRM1P35372 400 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 CDKN2AP42771 156 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 ARHGDIAP52565 204 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 CRISP1P54107 249 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 PER3P56645 1201 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 IL1RL1Q01638 556 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 TFF3Q07654 80 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 TOP3AQ13472 1001 aaPredicted RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 CAMK2DQ13557 499 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 C1DQ13901 141 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 HIST3H3Q16695 136 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 LRRC36Q1X8D7 754 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 TMEM201Q5SNT2 666 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 FBXW10Q5XX13 1052 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 NIPAL3Q6P499 406 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 CASP12Q6UXS9 341 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 ZBTB49Q6ZSB9 765 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 AAED1Q7RTV5 226 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 MCEMP1Q8IX19 187 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 C20orf196Q8IYI0 205 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 LNX2Q8N448 690 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 ARIH2OSQ8N7S6 290 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 OR6X1Q8NH79 312 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 LILRB4Q8NHJ6 448 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 MAGEE2Q8TD90 523 aaPredicted RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 DNAJC9Q8WXX5 260 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 TMEM54Q969K7 222 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 SDCCAG3Q96C92 435 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 RBM4BQ9BQ04 359 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 TACO1Q9BSH4 297 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 C9orf16Q9BUW7 83 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 RBM4Q9BWF3 364 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 TSSK6Q9BXA6 273 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 GABARAPL3Q9BY60 117 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 POLDIP3Q9BY77 421 aaKnown RBP8.73□□□□□ -1.01
CLN8-202ENST00000517514 SLC25A19Q9HC21 320 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 KRT84Q9NSB2 600 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 EMC3Q9P0I2 261 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 EMC9Q9Y3B6 208 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 DOPEY1Q5JWR5 2465 aa8.73□□□□□ -1.01
CLN8-202ENST00000517514 PRR14LQ5THK1 2151 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 A0A1W2PRG6 482 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 ZAR1LA6NP61 321 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 A8MXE2 369 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 H7C1C5 153 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 M0R129 80 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 MRPL33O75394 65 aaKnown RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 SNAP29O95721 258 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 BCL10O95999 233 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 IGHV3-9P01782 118 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 ACADSP16219 412 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 HIST1H1CP16403 213 aaKnown RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 BMP5P22003 454 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 CHRNB4P30926 498 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 SDHAP31040 664 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 RPL4P36578 427 aaKnown RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 ACVR1BP36896 505 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 GIPRP48546 466 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms