RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 RPA4Q13156 261 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 VGLL4Q14135 290 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 FAM53BQ14153 422 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 CARD16Q5EG05 197 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 BEND3Q5T5X7 828 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 PRMT9Q6P2P2 845 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 MORN3Q6PF18 240 aaPredicted RBP0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZNF493Q6ZR52 646 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 SLC25A46Q96AG3 418 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZNF681Q96N22 645 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZNF649Q9BS31 505 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 DESI2Q9BSY9 194 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 GABARAPL3Q9BY60 117 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 MRPL37Q9BZE1 423 aaKnown RBP0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 DDX19AQ9NUU7 478 aaKnown RBP0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 STRAPQ9Y3F4 350 aaKnown RBP0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 NACADO15069 1562 aa0.26□□□□□ -2.37
SNORA40.15-201ENST00000516884 IGKV1D-13A0A0B4J2D9 117 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 A0A1B0GVI7 797 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 NPIPA7E9PJI5 369 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 C3orf84H3BNL1 204 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 CA3P07451 260 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 NPIPA8P0DM63 369 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 IGKV1-13P0DP09 117 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 PCMT1P22061 227 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 DCKP27707 260 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 KIF5BP33176 963 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 HPCAL1P37235 193 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 MAP3K8P41279 467 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 CDH4P55283 916 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 RPS21P63220 83 aaKnown RBP0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 IL1RL1Q01638 556 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 AQP6Q13520 282 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 GINS1Q14691 196 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 SLC25A52Q3SY17 297 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 SMUG1Q53HV7 270 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR52E8Q6IFG1 317 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR6B2Q6IFH4 312 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 GUSBP11Q6P575 273 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 TMEM205Q6UW68 189 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 CASP12Q6UXS9 341 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 C16orf47Q6ZP98 133 aaPredicted RBP0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 DPY19L4Q7Z388 723 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 CCDC170Q8IYT3 715 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 MREGQ8N565 214 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 DENND6BQ8NEG7 585 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR9A2Q8NGT5 310 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR13G1Q8NGZ3 307 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR8U1Q8NH10 309 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 LILRB4Q8NHJ6 448 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 COQ8AQ8NI60 647 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 HGDQ93099 445 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZNF317Q96PQ6 595 aaPredicted RBP0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 LY9Q9HBG7 655 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 POPDC2Q9HBU9 364 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 YAE1D1Q9NRH1 226 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 UVRAGQ9P2Y5 699 aa0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 PACSIN2Q9UNF0 486 aaPredicted RBP0.25□□□□□ -2.37
SNORA40.15-201ENST00000516884 SCN4AP35499 1836 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 A0A0U1RQV5 110 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 RASGRF2O14827 1237 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 UPK3AO75631 287 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 GABARAPO95166 117 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 GAPDHP04406 335 aaKnown RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 HRES1P13985 223 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 MUTP22033 750 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 SFNP31947 248 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 TDO2P48775 406 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 NAPAP54920 295 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 PKNOX1P55347 436 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 FUT5Q11128 374 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 PDIA2Q13087 525 aaKnown RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 MXD4Q14582 209 aaPredicted RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 PON3Q15166 354 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR2L3Q8NG85 312 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR4K5Q8NGD3 323 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 OR4S2Q8NH73 311 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 GEMIN6Q8WXD5 167 aaKnown RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 FCGR1BQ92637 280 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZBED3Q96IU2 234 aaPredicted RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 NSMCE2Q96MF7 247 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZSCAN5AQ9BUG6 496 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 PARP12Q9H0J9 701 aaKnown RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 SAV1Q9H4B6 383 aaPredicted RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 ACTR8Q9H981 624 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 SYTL2Q9HCH5 934 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 FBXO6Q9NRD1 293 aaPredicted RBP0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 ZNF639Q9UID6 485 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 COPS3Q9UNS2 423 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 FBN2P35556 2912 aa0.24□□□□□ -2.37
SNORA40.15-201ENST00000516884 RPAP1Q9BWH6 1393 aaPredicted RBP0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 RPGRIP1LQ68CZ1 1315 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 CENPVL3A0A0U1RRI6 287 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 TMEM120BA0PK00 339 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 PFKFB2O60825 505 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 IGLV2-8P01709 118 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 OPN1MWP04001 364 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 HLA-DPB1P04440 258 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 OPN1MW2P0DN77 364 aa0.23□□□□□ -2.37
SNORA40.15-201ENST00000516884 OPN1MW3P0DN78 364 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms