RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PDP1Q9P0J1 537 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 SIGLEC7Q9Y286 467 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 ADAM18Q9Y3Q7 739 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 SPTBN1Q01082 2364 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC35F4A4IF30 521 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 M0R3G1 203 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 IMPA2O14732 288 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 DEAF1O75398 565 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 LYZL6O75951 148 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF432O94892 652 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 PPP1R3DO95685 299 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ADAP00813 363 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 TSPAN19P0C672 248 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 CDH2P19022 906 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 IGHV1-2P23083 117 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 FASP25445 335 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 RPL4P36578 427 aaKnown RBP8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 GSSP48637 474 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 HMGA2P52926 109 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 CTXN1P60606 82 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ZP4Q12836 540 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 FAPQ12884 760 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ACKR1Q16570 336 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ZBED5Q49AG3 693 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 CLEC12AQ5QGZ9 265 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 C1orf94Q6P1W5 598 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 NHLRC1Q6VVB1 395 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF620Q6ZNG0 422 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 PXKQ7Z7A4 578 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 STK32CQ86UX6 486 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 TMEM123Q8N131 208 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 GABRG1Q8N1C3 465 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 OR8D4Q8NGM9 314 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 GIPC3Q8TF64 312 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ASB10Q8WXI3 467 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 HTRA1Q92743 480 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 RASD2Q96D21 266 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 SAMD8Q96LT4 415 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 PSMG3-AS1Q96PY0 264 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 FEVQ99581 238 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 PLA2G12AQ9BZM1 189 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 SLCO5A1Q9H2Y9 848 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 OR52D1Q9H346 318 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 S100A14Q9HCY8 104 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 UPB1Q9UBR1 384 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 NOX1Q9Y5S8 564 aa8.65□□□□□ -1.02
TOPBP1-209ENST00000513818 ICE1Q9Y2F5 2266 aa8.65□□□□□ -1.03
TOPBP1-209ENST00000513818 TEX13CA0A0J9YWL9 993 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 LOC102725191A0A1B0GVB3 256 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 A0A1W2PRG6 482 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF726A6NNF4 738 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 PDLIM1O00151 329 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 HNRNPRO43390 633 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC43A1O75387 559 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 RAD51DO75771 328 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 KRT33AO76009 404 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 NDUFB2O95178 105 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ITGA5P08648 1049 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF23P17027 643 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 IFNGR2P38484 337 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 CD79BP40259 229 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 MYBPC1Q00872 1141 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 FMODQ06828 376 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 TSPAN31Q12999 210 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 FBXL19-AS1Q494R0 122 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 FBXW9Q5XUX1 488 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 SHQ1Q6PI26 577 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 SMARCD3Q6STE5 483 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 STAC2Q6ZMT1 411 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 MEX3BQ6ZN04 569 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF771Q7L3S4 317 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 IQCF1Q8N6M8 205 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ATG16L2Q8NAA4 619 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 SYT14Q8NB59 555 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 LINC01560Q8TB33 94 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 HDAC2Q92769 488 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 Q96M85 177 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF570Q96NI8 536 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 SMURF2Q9HAU4 748 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 FANCFQ9NPI8 374 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 TBC1D23Q9NUY8 699 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 KIF17Q9P2E2 1029 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 PLEKHB1Q9UF11 243 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF346Q9UL40 294 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 RCE1Q9Y256 329 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 BAHCC1Q9P281 2608 aa8.64□□□□□ -1.03
TOPBP1-209ENST00000513818 PTPN13Q12923 2485 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 A0A1W2PR80 420 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 SOCS2O14508 198 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 AKAP8O43823 692 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 MITFO75030 526 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 PTP4A3O75365 173 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 TRMUO75648 421 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC2A10O95528 541 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 BAG2O95816 211 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 BCL10O95999 233 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 IGHMP01871 453 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms