RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SLCO1C1Q9NYB5 712 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 WDR37Q9Y2I8 494 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 HS3ST3A1Q9Y663 406 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 UNC13BO14795 1591 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 NPIPB15A6NHN6 443 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 K7ERQ8 282 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 BMP6P22004 513 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 UFM1P61960 85 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 SPANXN4Q5MJ08 99 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 Q6ZTK2 550 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 KCTD20Q7Z5Y7 419 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 FAM58AQ8N1B3 248 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 PLPP7Q8NBV4 271 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 OR2T11Q8NH01 316 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 JMJD8Q96S16 334 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 PRDM9Q9NQV7 894 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 MAB21L2Q9Y586 359 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 A0A096LPE4 126 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 A0A1W2PPZ6 126 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 PCDH17O14917 1159 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 SYNGR2O43760 224 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 NCR1O76036 304 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CHRNB1P11230 501 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 NPY4RP50391 375 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TUBA3CQ13748 450 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 HYAL4Q2M3T9 481 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 NKAIN1Q4KMZ8 207 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ACSM6Q6P461 480 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 BAGE3Q86Y29 109 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 MAML2Q8IZL2 1156 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 NAGSQ8N159 534 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ASB17Q8WXJ9 295 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZMYND19Q96E35 227 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 TUBA8Q9NY65 449 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 ALKQ9UM73 1620 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZNF736B4DX44 427 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 TMIGD3P0DMS9 266 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 CYBAP13498 195 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CLDN6P56747 220 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 RING1Q06587 406 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CLINT1Q14677 625 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 RPE65Q16518 533 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 HLA-BQ31612 363 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 YOD1Q5VVQ6 348 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 SIGIRRQ6IA17 410 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 H1FNTQ75WM6 255 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 DPPA4Q7L190 304 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 OR2Z1Q8NG97 314 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 OR2M2Q96R28 347 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZNF334Q9HCZ1 680 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 PTTG2Q9NZH5 202 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 RBMX2Q9Y388 322 aaKnown RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 IGHV3-20A0A0C4DH32 117 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 H0YGG7 62 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 SLC16A6O15403 523 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 VDAC1P21796 283 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 HTR1EP28566 365 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ASCL1P50553 236 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CLDN15P56746 228 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 MAP4K2Q12851 820 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 SMUG1Q53HV7 270 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TMEM41BQ5BJD5 291 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 NDUFAF7Q7L592 441 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 VRK2Q86Y07 508 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 NAXDQ8IW45 347 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 OR8J1Q8NGP2 316 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CCL19Q99731 98 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ATG101Q9BSB4 218 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 SOX7Q9BT81 388 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TMEM147Q9BVK8 224 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZCCHC4Q9H5U6 513 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 PLEKHA2Q9HB19 425 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TMED7-TICAM2A0A0A6YYA0 188 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZNF705GA8MUZ8 300 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 BAMBIQ13145 260 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 GPR18Q14330 331 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TP53I3Q53FA7 332 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 DPY19L2P1Q6NXN4 242 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CYP4V2Q6ZWL3 525 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 ARHGEF39Q8N4T4 335 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 OR8U1Q8NH10 309 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZNF418Q8TF45 676 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 TOX2Q96NM4 488 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 CDX2Q99626 313 aaPredicted RBP8.25□□□□□ -1.09
VCAN-208ENST00000512590 C16orf70Q9BSU1 422 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TXNRD2Q9NNW7 524 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 SIX2Q9NPC8 291 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 ZNF391Q9UJN7 358 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 TMED7Q9Y3B3 224 aa8.25□□□□□ -1.09
VCAN-208ENST00000512590 BCL9O00512 1426 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 SYT5O00445 386 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 RAB3DO95716 219 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 CKMT2P17540 419 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 GABARAPL2P60520 117 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 CLN3Q13286 438 aa8.24□□□□□ -1.09
VCAN-208ENST00000512590 OR4F17Q8NGA8 305 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms