RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NMD3Q96D46 503 aaKnown RBP13.64□□□□□ -0.23
SCLT1-209ENST00000511426 SFXN2Q96NB2 322 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 UBL7Q96S82 380 aaPredicted RBP13.64□□□□□ -0.23
SCLT1-209ENST00000511426 ALG12Q9BV10 488 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 RPRD1BQ9NQG5 326 aaKnown RBP13.64□□□□□ -0.23
SCLT1-209ENST00000511426 AKR7A3O95154 331 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 CLUP10909 449 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 CPEP16870 476 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 AGFG1P52594 562 aaKnown RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 GFRA1P56159 465 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 GPR85P60893 370 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TPBGQ13641 420 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 CTF1Q16619 201 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 ATP1A1-AS1Q5TC04 95 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TMEM225Q6GV28 225 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 SLC35D2Q76EJ3 337 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 SLC22A16Q86VW1 577 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 SMPDL3BQ92485 455 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TSC22D3Q99576 134 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 COQ7Q99807 217 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 SF3B5Q9BWJ5 86 aaKnown RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TMEM185BQ9H7F4 350 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 MARCH7Q9H992 704 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TIGARQ9NQ88 270 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 B3GAT1Q9P2W7 334 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TMEM14AQ9Y6G1 99 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF292O60281 2723 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 ACOT7O00154 380 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 PHYHO14832 338 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 GLSO94925 669 aaPredicted RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 GYPBP06028 91 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 HSMCR30P0CW71 290 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 CD53P19397 219 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 PSMA1P25786 263 aaKnown RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 POU3F1Q03052 451 aaPredicted RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 MRPL28Q13084 256 aaKnown RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF322Q6U7Q0 402 aaPredicted RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 SLC16A9Q7RTY1 509 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 OR10H4Q8NGA5 316 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 OR5M1Q8NGP8 315 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TM9SF4Q92544 642 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 ALG8Q9BVK2 526 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TTTY12Q9BZ98 90 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 YIPF3Q9GZM5 350 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 TSPAN10Q9H1Z9 355 aaPredicted RBP13.63□□□□□ -0.23
SCLT1-209ENST00000511426 SYT4Q9H2B2 425 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 ACKR4Q9NPB9 350 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 NDUFB11Q9NX14 153 aa13.63□□□□□ -0.23
SCLT1-209ENST00000511426 A0A1W2PNR3 127 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 SLC22A23A1A5C7 686 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 HSPB2A8KAH6 182 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 AIREO43918 545 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 SERPINI2O75830 405 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 APOL3O95236 402 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 MT-ND5P03915 603 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 RFPL3SP0C7P2 107 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 IFNGR1P15260 489 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF43P17038 809 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 WT1P19544 449 aaPredicted RBP13.62□□□□□ -0.23
SCLT1-209ENST00000511426 GALP22466 123 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 GLO1Q04760 184 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 HSPB2Q16082 182 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 BCL2A1Q16548 175 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
SCLT1-209ENST00000511426 NHLRC1Q6VVB1 395 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 KCTD20Q7Z5Y7 419 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 LHFPL3Q86UP9 236 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 SLC35F2Q8IXU6 374 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 OR6K6Q8NGW6 343 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 OR6X1Q8NH79 312 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 ZPLD1Q8TCW7 415 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 UFD1Q92890 307 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 ZMYND19Q96E35 227 aaPredicted RBP13.62□□□□□ -0.23
SCLT1-209ENST00000511426 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCLT1-209ENST00000511426 TRIM36Q9NQ86 728 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 KLHL13Q9P2N7 655 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 DKK4Q9UBT3 224 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 WDFY3Q8IZQ1 3526 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 PCNX3Q9H6A9 2034 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 MPDZO75970 2070 aa13.62□□□□□ -0.23
SCLT1-209ENST00000511426 GVINP1Q7Z2Y8 2422 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 DCDC2BA2VCK2 349 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 TLX3O43711 291 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 TRAPPC6AO75865 159 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 PLGP00747 810 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 POU3F2P20265 443 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 SHC1P29353 583 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 TNFSF10P50591 281 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 TUBA1BP68363 451 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 FOXK1P85037 733 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 PLGLB1Q02325 96 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 FOXC1Q12948 553 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 NFATC3Q12968 1075 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF766Q5HY98 468 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms