RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 HSPB2Q16082 182 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 ACKR1Q16570 336 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 ACSM3Q53FZ2 586 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TRIM61Q5EBN2 209 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC25A53Q5H9E4 307 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 PHF19Q5T6S3 580 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 FAM205BPQ63HN1 556 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 CCBE1Q6UXH8 406 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 UNQ9370/PRO34162Q6UXP9 181 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 C16orf47Q6ZP98 133 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 HIST3H2AQ7L7L0 130 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 FAM220AQ7Z4H9 259 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 KCTD20Q7Z5Y7 419 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 CEACAM19Q7Z692 300 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 OR6V1Q8N148 313 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 OR8H2Q8N162 312 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 CELF2-AS1Q8N7Q2 184 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 SCAIQ8N9R8 606 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 AGBL5Q8NDL9 886 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF417Q8TAU3 575 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC22A8Q8TCC7 542 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TMEM234Q8WY98 164 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 RGP1Q92546 391 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 GHSRQ92847 366 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 HIST1H2ACQ93077 130 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 KLHL15Q96M94 604 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TSSK2Q96PF2 358 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF587Q96SQ5 575 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 OR11A1Q9GZK7 315 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 C11orf54Q9H0W9 315 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 SYT4Q9H2B2 425 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TXNIPQ9H3M7 391 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 WDR76Q9H967 626 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 GALNT9Q9HCQ5 603 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 B3GAT2Q9NPZ5 323 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 INIPQ9NRY2 104 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 CYSLTR2Q9NS75 346 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 OCIAD1Q9NX40 245 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 MRPL39Q9NYK5 338 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 NPAP1Q9NZP6 1156 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 COMMD3Q9UBI1 195 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 GRHPRQ9UBQ7 328 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 MRM2Q9UI43 246 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 FBXO4Q9UKT5 387 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF346Q9UL40 294 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 PCDHGB2Q9Y5G2 931 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 WIF1Q9Y5W5 379 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 FKBP7Q9Y680 259 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 UNC13CQ8NB66 2214 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TECTAO75443 2155 aa4.3□□□□□ -1.72
PDLIM5-214ENST00000510099 TRBV2A0A0J9YWF9 115 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 TRBV5-5A0A0J9YX44 114 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 A0A1W2PNV4 684 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 TVP23AA6NH52 213 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 A6NIZ1 184 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 LIPT2A6NK58 231 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 FAM171A2A8MVW0 826 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF879B4DU55 563 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 B4E171 279 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 C9J4A7 227 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 C11orf98E9PRG8 122 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 XKRYO14609 159 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 MAGEB4O15481 346 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 FLRT2O43155 660 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 OR2T1O43869 369 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 TMCC2O75069 709 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 TMEM127O75204 238 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ZFPL1O95159 310 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 KRT8P05787 483 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 EIF4EP06730 217 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 GP1BAP07359 652 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 UMODP07911 640 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 SYPP08247 313 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF883P0CG24 379 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 OR8G3PP0DMU2 310 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 PSKH1P11801 424 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 COX6A1P12074 109 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 CTLA4P16410 223 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF28P17035 718 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ATF1P18846 271 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ELK1P19419 428 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 ALOX5APP20292 161 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 RAB3BP20337 219 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 NPR2P20594 1047 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 APEX1P27695 318 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 MSX1P28360 303 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 CCKBRP32239 447 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 PSMB10P40306 273 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 APOBEC1P41238 236 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 TSPAN7P41732 249 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 CASP3P42574 277 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 MAP2K3P46734 347 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 CENPAP49450 140 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 MAP2K6P52564 334 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 BLVRAP53004 296 aa4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 NANOS3P60323 173 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-214ENST00000510099 RAP1BP61224 184 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms