RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 OFCC1Q8IZS5 231 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 CADM2Q8N3J6 435 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 PAPD5Q8NDF8 572 aaKnown RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM57AQ8TBR7 257 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 CPNE4Q96A23 557 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 MIB2Q96AX9 1013 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC41A3Q96GZ6 507 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 C7orf34Q96L11 122 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF300Q96RE9 604 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 TIMP4Q99727 224 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 PIP5K1AQ99755 562 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 FNDC11Q9BVV2 318 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 RSPO3Q9BXY4 272 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 AMBRA1Q9C0C7 1298 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 KLHL4Q9C0H6 718 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 MS4A7Q9GZW8 240 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 TP63Q9H3D4 680 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 CALHM2Q9HA72 323 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 KRCC1Q9NPI7 259 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 CTPS2Q9NRF8 586 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 LUZP4Q9P127 313 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 NTNG1Q9Y2I2 539 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 RPH3AQ9Y2J0 694 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 LRCH1Q9Y2L9 728 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 TMED7Q9Y3B3 224 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF337Q9Y3M9 751 aa4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 SPENQ96T58 3664 aaKnown RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 INTS1Q8N201 2190 aaKnown RBP4.91□□□□□ -1.62
HMGB1P44-201ENST00000508597 MED12LQ86YW9 2145 aa4.9□□□□□ -1.62
HMGB1P44-201ENST00000508597 DOCK7Q96N67 2140 aa4.9□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRAV36DV7A0A075B6V5 113 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 A0A1B0GUH1 482 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 A0A1W2PRQ8 180 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 CD8B2A6NJW9 211 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 CPSF4LA6NMK7 179 aaKnown RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 NPIPA2E9PIF3 369 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 NPIPA3F8WFD2 350 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 HNRNPRO43390 633 aaKnown RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 EFNA2O43921 213 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 GMFGO60234 142 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC19A2O60779 497 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 NPIPB7O75200 414 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 INMTO95050 263 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 AHSA1O95433 338 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 GPANK1O95872 356 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 H1F0P07305 194 aaKnown RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 STSP08842 583 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 FCGR2AP12318 317 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 PRG2P13727 222 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 MAKP20794 623 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 HTR2AP28223 471 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 TIMP3P35625 211 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 IFNGR2P38484 337 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR1E2P47887 323 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ARHGDIAP52565 204 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 CDH12P55289 794 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 CLDN18P56856 261 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 CARD18P57730 90 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC35A1P78382 337 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 DGCR6Q14129 220 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 TMEM176BQ3YBM2 270 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ANKDD1AQ495B1 522 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 GXYLT1Q4G148 440 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 IQCCQ4KMZ1 466 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 COLEC12Q5KU26 742 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 DEF8Q6ZN54 512 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 TMPPEQ6ZT21 453 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 RRM2BQ7LG56 351 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 COMTD1Q86VU5 262 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 SPATA24Q86W54 205 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 LACC1Q8IV20 430 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ADGRG5Q8IZF4 528 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 CDK20Q8IZL9 346 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC43A2Q8N370 569 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR4D11Q8NGI4 311 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR2V1Q8NHB1 315 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 MFSD8Q8NHS3 518 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 VANGL1Q8TAA9 524 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ASB10Q8WXI3 467 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ACOT11Q8WXI4 607 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZHX1-C8orf76Q96EF9 292 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 RSRC1Q96IZ7 334 aaKnown RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ADGRG7Q96K78 797 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 KLHL15Q96M94 604 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZFP3Q96NJ6 502 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 NAA11Q9BSU3 229 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF426Q9BUY5 554 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 TAPBPLQ9BX59 468 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 GLRX2Q9NS18 164 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ARMC1Q9NVT9 282 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 NDUFAF4Q9P032 175 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 SPRR3Q9UBC9 169 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 RIMS3Q9UJD0 308 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 MCTS1Q9ULC4 181 aaKnown RBP4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 A4GNTQ9UNA3 340 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 AURKCQ9UQB9 309 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC6A5Q9Y345 797 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF175Q9Y473 711 aa4.9□□□□□ -1.63
HMGB1P44-201ENST00000508597 LIPGQ9Y5X9 500 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms