RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 OR2A12Q8NGT7 310 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ZNF607Q96SK3 696 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 SLC6A7Q99884 636 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 GGT3PA6NGU5 568 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 IFITM5A6NNB3 132 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 TSPAN6O43657 245 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ADAMTS4O75173 837 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ADAP1O75689 374 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 SLC25A27O95847 323 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 GPANK1O95872 356 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 HMGN2P05204 90 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 SLC35G4P0C7Q5 338 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 CPN1P15169 458 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 MAKP20794 623 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 LSSP48449 732 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ZNF616Q08AN1 781 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 DHRS2Q13268 280 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 VGLL4Q14135 290 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 MST1LQ2TV78 715 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 NKAIN1Q4KMZ8 207 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ENTPD8Q5MY95 495 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 PWWP2BQ6NUJ5 590 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 MEPCEQ7L2J0 689 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 LRRC70Q7Z2Q7 622 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 LRRC18Q8N456 261 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 HPSE2Q8WWQ2 592 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 PELI1Q96FA3 418 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 Q96M85 177 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 SPOCK3Q9BQ16 436 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 OR52D1Q9H346 318 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 GAR1Q9NY12 217 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 METTL1Q9UBP6 276 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ANKRD36A6QL64 1941 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 KIF26AQ9ULI4 1882 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 C17orf113A0A1B0GUU1 675 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 H7C0S8 307 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 GFYI3L273 518 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 LEFTY2O00292 366 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 GMFGO60234 142 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 IGHV2-5P01817 119 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 GLI4P10075 376 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ELNP15502 786 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 AGAP20933 346 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 PSMB5P28074 263 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 OMPP47874 163 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 OR1G1P47890 313 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 RGS8P57771 180 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 NANOS3P60323 173 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ACY1Q03154 408 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 UBE2NLQ5JXB2 153 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 DMRTA1Q5VZB9 504 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 MFSD12Q6NUT3 480 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 MED27Q6P2C8 311 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 BAIAP2L2Q6UXY1 529 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 GPR142Q7Z601 462 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 GVQW1Q8N7I0 195 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 OR51F2Q8NH61 342 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 RNASE11Q8TAA1 199 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 PIGXQ8TBF5 258 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 CD99L2Q8TCZ2 262 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 CMBLQ96DG6 245 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 LCORQ96JN0 433 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 NEU1Q99519 415 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 MCHR1Q99705 422 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ACBD6Q9BR61 282 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ALX4Q9H161 411 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 TCEAL2Q9H3H9 227 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 RGCCQ9H4X1 137 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 TMEM27Q9HBJ8 222 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 APMAPQ9HDC9 416 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 TNFSF18Q9UNG2 199 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 TMED7Q9Y3B3 224 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 SNRNP200O75643 2136 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 SCAF4O95104 1147 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ADRA2CP18825 462 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 DPP4P27487 766 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 CERS1P27544 350 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 RAG2P55895 527 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 S100A10P60903 97 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 RPS11P62280 158 aaKnown RBP eCLIP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 DUSP2Q05923 314 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 KHDC3LQ587J8 217 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ARHGAP40Q5TG30 622 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 PLPP4Q5VZY2 271 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 RPL7L1Q6DKI1 246 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 LCN10Q6JVE6 187 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 FBXO46Q6PJ61 603 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 PRSS55Q6UWB4 352 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 LCTLQ6UWM7 567 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 Q6ZVL8 140 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 REC114Q7Z4M0 266 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 OR4N5Q8IXE1 308 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 JAGN1Q8N5M9 183 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 ADAD2Q8NCV1 583 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 NLGN2Q8NFZ4 835 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 OR4K14Q8NGD5 310 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 OR52E2Q8NGJ4 325 aa6.63□□□□□ -1.35
LIMCH1-207ENST00000508466 NPRL2Q8WTW4 380 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms