RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 POLR1EQ9GZS1 481 aaKnown RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 ZNF702PQ9H963 129 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 RAB18Q9NP72 206 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 SLC17A5Q9NRA2 495 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 PRR34Q9NV39 138 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 B4GALT7Q9UBV7 327 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 CA5BQ9Y2D0 317 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 MRPS7Q9Y2R9 242 aaKnown RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 THADAQ6YHU6 1953 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 GOLGA4Q13439 2230 aaKnown RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 MAST4O15021 2626 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 WDFY3Q8IZQ1 3526 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 IGF2RP11717 2491 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 IGHV2-70DA0A0C4DH43 119 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 A0A1W2PNV4 684 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 ZNF705EA8MWA4 302 aaPredicted RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 NPIPA7E9PJI5 369 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 BTN3A3O00478 584 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 SLC9A3R1O14745 358 aaPredicted RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 CHMP2AO43633 222 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 DFNA5O60443 496 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 TBL1XO60907 577 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 LYPLA2O95372 231 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 PLEKHA8P1O95397 391 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 H2BFMP0C1H6 154 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 NPIPA8P0DM63 369 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 DIO3P55073 304 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 UCNP55089 124 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 OC90Q02509 493 aaPredicted RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 SRSF5Q13243 272 aaKnown RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 DMC1Q14565 340 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 PON2Q15165 354 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 PRR30Q53SZ7 412 aaPredicted RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 EOGTQ5NDL2 527 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 ATL3Q6DD88 541 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 TPRA1Q86W33 373 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 ANKFN1Q8N957 763 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 SYT14Q8NB59 555 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 DEFB124Q8NES8 71 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 OR10H4Q8NGA5 316 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 TRMT10AQ8TBZ6 339 aaKnown RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 ING5Q8WYH8 240 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 IFT74Q96LB3 600 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 CNOT6LQ96LI5 555 aaKnown RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 MCHR1Q99705 422 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 SPATA16Q9BXB7 569 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 NXF3Q9H4D5 531 aaKnown RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 CLMPQ9H6B4 373 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 UXTQ9UBK9 157 aaPredicted RBP4.29□□□□□ -1.72
HERC4-213ENST00000506515 NPIPA1Q9UND3 350 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 LOC400499M0QZD8 3231 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 MYO18BQ8IUG5 2567 aa4.29□□□□□ -1.72
HERC4-213ENST00000506515 NOTCH3Q9UM47 2321 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 SMG1Q96Q15 3661 aaKnown RBP4.28□□□□□ -1.72
HERC4-213ENST00000506515 METTL21EPA6NDL7 271 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 E7ENQ6 273 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 UGT2B17O75795 530 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 LY6G6DO95868 133 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 HSPB1P04792 205 aaKnown RBP4.28□□□□□ -1.72
HERC4-213ENST00000506515 SFTPCP11686 197 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 IGLL1P15814 213 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 PSMB1P20618 241 aaKnown RBP4.28□□□□□ -1.72
HERC4-213ENST00000506515 CD80P33681 288 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 ARL2P36404 184 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 KIR2DS2P43631 304 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 HNMTP50135 292 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 ARPP19P56211 112 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 SLC10A7Q0GE19 358 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 TWF1Q12792 350 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 AANATQ16613 207 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 ISXQ2M1V0 245 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 TP53I3Q53FA7 332 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 FHL5Q5TD97 284 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 TFAP2EQ6VUC0 442 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 MOB3BQ86TA1 216 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 ZNF683Q8IZ20 524 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 TMEM123Q8N131 208 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 DHRSXQ8N5I4 330 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 ATP6V0D2Q8N8Y2 350 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 RLN3Q8WXF3 142 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 MRPS31Q92665 395 aaKnown RBP4.28□□□□□ -1.72
HERC4-213ENST00000506515 FGGYQ96C11 551 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 PELI1Q96FA3 418 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 C7orf34Q96L11 122 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 B3GALT6Q96L58 329 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 TCHPQ9BT92 498 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 NMUR2Q9GZQ4 415 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 PTGES2Q9H7Z7 377 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 SIGLEC8Q9NYZ4 499 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 WARS2Q9UGM6 360 aaKnown RBP4.28□□□□□ -1.72
HERC4-213ENST00000506515 UBQLN1Q9UMX0 589 aaKnown RBP4.28□□□□□ -1.72
HERC4-213ENST00000506515 RPH3ALQ9UNE2 315 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 PLLPQ9Y342 182 aa4.28□□□□□ -1.72
HERC4-213ENST00000506515 ATG2BQ96BY7 2078 aa4.27□□□□□ -1.73
HERC4-213ENST00000506515 TUBAL3A6NHL2 446 aa4.27□□□□□ -1.73
HERC4-213ENST00000506515 ZFP92A6NM28 416 aa4.27□□□□□ -1.73
HERC4-213ENST00000506515 GPR89AB7ZAQ6 455 aa4.27□□□□□ -1.73
HERC4-213ENST00000506515 RS1O15537 224 aa4.27□□□□□ -1.73
HERC4-213ENST00000506515 MTX2O75431 263 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms