RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FAM71E2Q8N5Q1 922 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 OR1E3Q8WZA6 343 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF223Q9UK11 482 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 PIP5K1CO60331 668 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 ITGBL1O95965 494 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 HOXD12P35452 270 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 TPMTP51580 245 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 RBPJQ06330 500 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 PYCR3Q53H96 274 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 LPCAT3Q6P1A2 487 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 WDR88Q6ZMY6 472 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 LINC00299Q6ZSB3 139 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 ANKRD33Q7Z3H0 272 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC38A1Q9H2H9 487 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 FGF22Q9HCT0 170 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 PLEKHM1Q9Y4G2 1056 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 NPFFR2Q9Y5X5 522 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 TMEM221A6NGB7 291 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 SULT1B1O43704 296 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 PTBP1P26599 531 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 CARD18P57730 90 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 BCDIN3DQ7Z5W3 292 aaKnown RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 OR6M1Q8NGM8 313 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 SDSLQ96GA7 329 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 OCSTAMPQ9BR26 566 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 MKRN2Q9H000 416 aaKnown RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 OR14J1Q9UGF5 321 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 DAPP1Q9UN19 280 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 C19orf53Q9UNZ5 99 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 K7ESM1 405 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 CHRNB1P11230 501 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 BLVRBP30043 206 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 ADPRHP54922 357 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 KCNJ8Q15842 424 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 RSPO2Q6UXX9 243 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 NANOGP1Q8N7R0 232 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 THSD7AQ9UPZ6 1657 aa15.24■□□□□ 0.03
PCDHA1-203ENST00000504120 TMEM129A0AVI4 362 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ARGFXA6NJG6 315 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 P2RY10O00398 339 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 NAGAP17050 411 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 CPT2P23786 658 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 C1orf140Q5VVS0 124 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 MARCH3Q86UD3 253 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF511Q8NB15 262 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SELENOIQ9C0D9 397 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 MYO5AQ9Y4I1 1855 aaKnown RBP15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 A0A087WUU8 490 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 GLSO94925 669 aaPredicted RBP15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 TCRBP04435 133 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SERPINA7P05543 415 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 THBS1P07996 1170 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 EPHA5P54756 1037 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ISL1P61371 349 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SRPXP78539 464 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 IKZF1Q13422 519 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 Q6ZTK2 550 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 GRINAQ7Z429 371 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC37A2Q8TED4 501 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SLAMF9Q96A28 289 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF775Q96BV0 537 aaPredicted RBP15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 GALNT9Q9HCQ5 603 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 KLK8O60259 260 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ALOX12BO75342 701 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 DUSP5Q16690 384 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ARHGAP11BQ3KRB8 267 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 NKX3-1Q99801 234 aaPredicted RBP15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC6A17Q9H1V8 727 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF576Q9H609 170 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 DYNLRB1Q9NP97 96 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 C19orf12Q9NSK7 152 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 COQ3Q9NZJ6 369 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 TRAPPC2LQ9UL33 140 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 PCDHB10Q9UN67 800 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 LOC100289279A0A1B0GTE1 492 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 PRAMEF25A6NGN4 478 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 GPR171O14626 319 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 MSTNO14793 375 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 CYB5BO43169 146 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ABOP16442 354 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 PLA2G7Q13093 441 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ELAVL1Q15717 326 aaKnown RBP15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 STEAP1BQ6NZ63 245 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 FER1L6-AS2Q96M78 137 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 HRH4Q9H3N8 390 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ACER3Q9NUN7 267 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 HAO2Q9NYQ3 351 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 CLEC2DQ9UHP7 191 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 MYO18AQ92614 2054 aaKnown RBP15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 C2orf72A6NCS6 295 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 BET1O15155 118 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 NID1P14543 1247 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 GABRA2P47869 451 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 TAS2R30P59541 319 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 ADPRMQ3LIE5 342 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 WDR5BQ86VZ2 330 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 LINC00346Q8IVM7 164 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SIAH3Q8IW03 269 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 FRZBQ92765 325 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 PRR14Q9BWN1 585 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms