RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 POTEKPQ9BYX7 375 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 VSX1Q9NZR4 365 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 ALPK2Q86TB3 2170 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 PMS2P1A4D2B8 440 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 MS4A18H0YCH9 400 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 FZD7O75084 574 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 TRIM3O75382 744 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 SF3A2Q15428 464 aaKnown RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 MS4A18Q3C1V0 323 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 OPN5Q6U736 354 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 TIPARPQ7Z3E1 657 aaKnown RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 WDSUB1Q8N9V3 476 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 ATF6BQ99941 703 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 CCDC32Q9BV29 185 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 FKBP7Q9Y680 259 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 KMT2EQ8IZD2 1858 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 NSG1A0A0A6YYJ2 146 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 SHISA8B8ZZ34 492 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 NCR1O76036 304 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 DLGAP3O95886 979 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 GDI2P50395 445 aaKnown RBP19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 PSMD7P51665 324 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 DDI2Q5TDH0 399 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 C6orf15Q6UXA7 325 aaPredicted RBP19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 ARMC10Q8N2F6 343 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 TEX19Q8NA77 164 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 RELTQ969Z4 430 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 RNF166Q96A37 237 aaPredicted RBP19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 TAAR9Q96RI9 348 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 DDA1Q9BW61 102 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 SPRY4Q9C004 299 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 FBXL2Q9UKC9 423 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 KLHDC2Q9Y2U9 406 aa19.22■□□□□ 0.67
UBE2D3-216ENST00000503742 CFL1P23528 166 aaKnown RBP19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 SHC1P29353 583 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 PUDPQ08623 228 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 OR7A5Q15622 319 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 ACSM3Q53FZ2 586 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 CCDC157Q569K6 752 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 FAM27D1Q5T7N8 215 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 CDCP2Q5VXM1 449 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 IL20RBQ6UXL0 311 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 CEACAM19Q7Z692 300 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 NR2C2APQ86WQ0 139 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 NTNG2Q96CW9 530 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 LIN37Q96GY3 246 aaPredicted RBP19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 MNTQ99583 582 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF160Q9HCG1 818 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 B9D1Q9UPM9 204 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 EML6Q6ZMW3 1958 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 A0A0C4DFX4 3053 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 TVP23AA6NH52 213 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 AKR7A3O95154 331 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF79Q15937 498 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 H1FNTQ75WM6 255 aaPredicted RBP19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 PPP1R32Q7Z5V6 425 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 KCTD20Q7Z5Y7 419 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 NXPE2Q96DL1 559 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 PISDQ9UG56 409 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 TCFL5Q9UL49 500 aa19.21■□□□□ 0.67
UBE2D3-216ENST00000503742 A0A1W2PRG6 482 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 LIPT2A6NK58 231 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 RAB40ALP0C0E4 278 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 ZNF806P0C7X5 589 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 HLA-DOBP13765 273 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 EDNRAP25101 427 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 PSMB10P40306 273 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 CLDN6P56747 220 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 RPS11P62280 158 aaKnown RBP eCLIP19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 GLYR1Q49A26 553 aaPredicted RBP19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 SLC22A16Q86VW1 577 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 OR13C5Q8NGS8 318 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 CT55Q8WUE5 264 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 CDCP1Q9H5V8 836 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 WDR76Q9H967 626 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 SH2D2AQ9NP31 389 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 FANCFQ9NPI8 374 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 POLE4Q9NR33 117 aa19.2■□□□□ 0.66
UBE2D3-216ENST00000503742 TRBV2A0A0J9YWF9 115 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 SLC22A23A1A5C7 686 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 NPIPB13A6NJU9 1138 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 NPIPB4C9JG80 1138 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 SERPINA3P01011 423 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 MLF1P58340 268 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 DNASE1L3Q13609 305 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 TPRA1Q86W33 373 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 RPS19BP1Q86WX3 136 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 KDM8Q8N371 416 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 ADAD1Q96M93 576 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 KLHL15Q96M94 604 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 INTS14Q96SY0 518 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 CHST11Q9NPF2 352 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 MRM2Q9UI43 246 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 IGLV1-36A0A0B4J1U3 117 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 ABHD16AO95870 558 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 TCN2P20062 427 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 ALOX5APP20292 161 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 SSR4P51571 173 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 RPS18P62269 152 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 PPP3R1P63098 170 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms