RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 CXXC5Q7LFL8 322 aaKnown RBP13.55□□□□□ -0.24
MBD4-204ENST00000503197 ADGRE4PQ86SQ3 457 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 RNF128Q8TEB7 428 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 ABHD3Q8WU67 409 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 HDAC2Q92769 488 aaKnown RBP13.55□□□□□ -0.24
MBD4-204ENST00000503197 ZNF582Q96NG8 517 aaPredicted RBP13.55□□□□□ -0.24
MBD4-204ENST00000503197 ZNF385AQ96PM9 386 aaKnown RBP13.55□□□□□ -0.24
MBD4-204ENST00000503197 EMC6Q9BV81 110 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 SF3B5Q9BWJ5 86 aaKnown RBP13.55□□□□□ -0.24
MBD4-204ENST00000503197 ASF1BQ9NVP2 202 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 CLCA1A8K7I4 914 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 SMNDC1O75940 238 aaKnown RBP eCLIP13.55□□□□□ -0.244e-6■■■■□ 21.7
MBD4-204ENST00000503197 BCL10O95999 233 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 SFTPCP11686 197 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 NUDT6P53370 316 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 SLC16A1P53985 500 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
MBD4-204ENST00000503197 LEG1Q6P5S2 330 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 OR5M9Q8NGP3 310 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 RHNO1Q9BSD3 238 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 AMBNQ9NP70 447 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 SVILO95425 2214 aa13.55□□□□□ -0.24
MBD4-204ENST00000503197 SLC1A7O00341 560 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 ARHGEF9O43307 516 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 TGM6O95932 706 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 RPSAP08865 295 aaKnown RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 CLUP10909 449 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 NTF4P34130 210 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 BIDP55957 195 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 CXCR4P61073 352 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 EEF1A1P5Q5VTE0 462 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 NXNL2Q5VZ03 156 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 PM20D2Q8IYS1 436 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 BPIFB6Q8NFQ5 453 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 ZNF566Q969W8 418 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 NMNAT2Q9BZQ4 307 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 CLN6Q9NWW5 311 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 FLVCR1Q9Y5Y0 555 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 PRSS37A4D1T9 235 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 SLC35F4A4IF30 521 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 PRR23D1E9PI22 279 aaPredicted RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 SYNGR4O95473 234 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 PRR23D2P0DMB1 279 aaPredicted RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 SLC2A5P22732 501 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 CRHBPP24387 322 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 ACVR2AP27037 513 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 CALRP27797 417 aaKnown RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 CLDN17P56750 224 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 MEDAGQ5VYS4 303 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 CHMP1BQ7LBR1 199 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 ADCK1Q86TW2 530 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 JAZF1Q86VZ6 243 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 OR9Q1Q8NGQ5 310 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 SGCDQ92629 289 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 ZNF775Q96BV0 537 aaPredicted RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 KCNK17Q96T54 332 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 MRPL13Q9BYD1 178 aaKnown RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 PAK1IP1Q9NWT1 392 aaPredicted RBP13.54□□□□□ -0.24
MBD4-204ENST00000503197 CLCF1Q9UBD9 225 aa13.54□□□□□ -0.24
MBD4-204ENST00000503197 IGKV3D-15A0A087WSY6 115 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 SH3D21A4FU49 640 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 A6NIZ1 184 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 DCTN6O00399 190 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 XKRYO14609 159 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 ZNF432O94892 652 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 GYPBP06028 91 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 LYNP07948 512 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 PTGS2P35354 604 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 RAP1BP61224 184 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 RAP1AP62834 184 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 GTF3C1Q12789 2109 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 NIPAL3Q6P499 406 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 OTULINQ96BN8 352 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 Q96MT0 163 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 TSSK2Q96PF2 358 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 SYT4Q9H2B2 425 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 RPRD1BQ9NQG5 326 aaKnown RBP13.53□□□□□ -0.24
MBD4-204ENST00000503197 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 ASB6Q9NWX5 421 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 MYRFQ9Y2G1 1151 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 ZNF175Q9Y473 711 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 CACNA1BQ00975 2339 aa13.53□□□□□ -0.24
MBD4-204ENST00000503197 SLC22A23A1A5C7 686 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 TRIM64A6NGJ6 449 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 SLC22A20A6NK97 555 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 PRODHO43272 600 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.24
MBD4-204ENST00000503197 CCDC159P0C7I6 412 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 RBM48Q5RL73 367 aaKnown RBP13.52□□□□□ -0.24
MBD4-204ENST00000503197 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 SYT14Q8NB59 555 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 OR6X1Q8NH79 312 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 SNX18Q96RF0 628 aa13.52□□□□□ -0.24
MBD4-204ENST00000503197 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.24
MBD4-204ENST00000503197 TNFAIP8O95379 198 aa13.52□□□□□ -0.25
MBD4-204ENST00000503197 PGA4P0DJD7 388 aa13.52□□□□□ -0.25
MBD4-204ENST00000503197 PGA3P0DJD8 388 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms