RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 HDAC3O15379 428 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 TRAF3IP2O43734 574 aaPredicted RBP11.73□□□□□ -0.53
SHANK2-217ENST00000498519 BCL10O95999 233 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 MT-ND5P03915 603 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 ETS2P15036 469 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 TCN1P20061 433 aaPredicted RBP11.73□□□□□ -0.53
SHANK2-217ENST00000498519 GATA3P23771 443 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 COL8A2P25067 703 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 ALDH3B1P43353 468 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 NCALDP61601 193 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 PIGFQ07326 219 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 FXNQ16595 210 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 NKPD1Q17RQ9 610 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 ALG10BQ5I7T1 473 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 CARD17Q5XLA6 110 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 PIWIL3Q7Z3Z3 882 aaKnown RBP11.73□□□□□ -0.53
SHANK2-217ENST00000498519 KRT73Q86Y46 540 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 TREML1Q86YW5 311 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 SNX33Q8WV41 574 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 ZNF837Q96EG3 531 aaPredicted RBP11.73□□□□□ -0.53
SHANK2-217ENST00000498519 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 FOXB1Q99853 325 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 C1orf198Q9H425 327 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 HEATR1Q9H583 2144 aaKnown RBP11.73□□□□□ -0.53
SHANK2-217ENST00000498519 NARFLQ9H6Q4 476 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 EVA1AQ9H8M9 152 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 A4GALTQ9NPC4 353 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 ZIM2Q9NZV7 527 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 TENM1Q9UKZ4 2725 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
SHANK2-217ENST00000498519 A0A087WUJ7 227 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 SDHDO14521 159 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 SEC14L2O76054 403 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 FARS2O95363 451 aaKnown RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 PTHP01270 115 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 SERPINA5P05154 406 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 B4GALT1P15291 398 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 EGR1P18146 543 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 BGNP21810 368 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 GIPRP48546 466 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 ARFIP2P53365 341 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 PUDPQ08623 228 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 PMS2P3Q13401 168 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 KRT71Q3SY84 523 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 RPS26P11Q5JNZ5 115 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 FAM209AQ5JX71 171 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 C6orf10Q5SRN2 563 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 NXNQ6DKJ4 435 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 RGS7BPQ6MZT1 257 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 PXKQ7Z7A4 578 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 BHLHE22Q8NFJ8 381 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 SLC41A3Q96GZ6 507 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 LRMDAQ9H2I8 198 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 NTN4Q9HB63 628 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 TMEM27Q9HBJ8 222 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 HINT3Q9NQE9 182 aaKnown RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 NKIRAS2Q9NYR9 191 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 KLHL14Q9P2G3 628 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 SEC14L4Q9UDX3 406 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 SLC13A4Q9UKG4 626 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 CHST2Q9Y4C5 530 aa11.72□□□□□ -0.53
SHANK2-217ENST00000498519 NUP214P35658 2090 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-217ENST00000498519 A0A1B0GWA3 101 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 PRORSD1PA6NEY8 169 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 MS4A18H0YCH9 400 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 OR6A2O95222 327 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 FPR2P25090 351 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 EPHA3P29320 983 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 CSNK1A1P48729 337 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 SEC24CP53992 1094 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 LMO4P61968 165 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 HOXC5Q00444 222 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 RGNQ15493 299 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
SHANK2-217ENST00000498519 BPIFB2Q8N4F0 458 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 NANPQ8TBE9 248 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 C11orf40Q8WZ69 217 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 THAP1Q9NVV9 213 aa11.71□□□□□ -0.53
SHANK2-217ENST00000498519 MRPL39Q9NYK5 338 aaKnown RBP11.71□□□□□ -0.53
SHANK2-217ENST00000498519 TESQ9UGI8 421 aaKnown RBP11.71□□□□□ -0.53
SHANK2-217ENST00000498519 C17orf100A8MU93 164 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 RP2O75695 350 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 MPZL1O95297 269 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 MT-ATP6P00846 226 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 OR8G3PP0DMU2 310 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 NAT2P11245 290 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 BMP2P12643 396 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 AHCYP23526 432 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 RAD52P43351 418 aa11.7□□□□□ -0.54
SHANK2-217ENST00000498519 POLR2JP52435 117 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms