RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 KPNA4O00629 521 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SOCS6O14544 535 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 TLX2O43763 284 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SCO2O43819 266 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 XPNPEP2O43895 674 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PIP5K1CO60331 668 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 RAD1O60671 282 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 BCAS1O75363 584 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PTP4A3O75365 173 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 WBP4O75554 376 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ITGA10O75578 1167 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC25A12O75746 678 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 OR2J2O76002 312 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 NADKO95544 446 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 HIST1H2ABP04908 130 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF12P17014 697 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 GABRB1P18505 474 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 FUT1P19526 365 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC6A6P31641 620 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 GRK5P34947 590 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 DLSTP36957 453 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ALDH3B2P48448 385 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PCYT1AP49585 367 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SSR4P51571 173 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 FBXW4P57775 412 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 FOXL2P58012 376 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 GPR85P60893 370 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC35A2P78381 396 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF117Q03924 483 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 CRYZQ08257 329 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SNTA1Q13424 505 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 CD226Q15762 336 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 NTRK2Q16620 822 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 NDUFAF6Q330K2 333 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZBED5Q49AG3 693 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 NADK2Q4G0N4 442 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 KLHL22Q53GT1 634 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC25A30Q5SVS4 291 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 LAIR2Q6ISS4 152 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ACSM5Q6NUN0 579 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC30A6Q6NXT4 461 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 JMJD6Q6NYC1 403 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SMARCD3Q6STE5 483 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 C5orf46Q6UWT4 87 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF620Q6ZNG0 422 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 HIST3H2AQ7L7L0 130 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 OAFQ86UD1 273 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 RPS19BP1Q86WX3 136 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 KIF18BQ86Y91 864 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 CCDC71Q8IV32 467 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM156Q8N614 296 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 TCEANCQ8N8B7 351 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZBTB8BQ8NAP8 495 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 OR2T33Q8NG76 320 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 OR11G2Q8NGC1 345 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PFN4Q8NHR9 129 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 C9orf43Q8TAL5 461 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM163Q8TC26 289 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 FNDC8Q8TC99 324 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 BRIX1Q8TDN6 353 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 GPR119Q8TDV5 335 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ASB15Q8WXK1 588 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ST8SIA1Q92185 356 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 GGHQ92820 318 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 HIST1H2ACQ93077 130 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 HGDQ93099 445 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 RFKQ969G6 155 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SPACA9Q96E40 222 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ARSGQ96EG1 525 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SH3YL1Q96HL8 342 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 RASL10BQ96S79 203 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 SECISBP2Q96T21 854 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 COPS4Q9BT78 406 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF426Q9BUY5 554 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 OR52D1Q9H346 318 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 DSN1Q9H410 356 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 CDCP1Q9H5V8 836 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 EGLN3Q9H6Z9 239 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PTGES2Q9H7Z7 377 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 METTL7AQ9H8H3 244 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF160Q9HCG1 818 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 MEPEQ9NQ76 525 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 FAIMQ9NVQ4 179 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 TAS2R10Q9NYW0 307 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 CNOT2Q9NZN8 540 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 KLRF1Q9NZS2 232 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PSORS1C1Q9UIG5 152 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 RPL36Q9Y3U8 105 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 PCDHGB1Q9Y5G3 927 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 APCP25054 2843 aa4.78□□□□□ -1.65
HMGXB4-208ENST00000498325 FER1L5A0AVI2 2057 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 MED13Q9UHV7 2174 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 hCG_2014768A0A024R1R8 64 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TMED7-TICAM2A0A0A6YYA0 188 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ANKUB1A6NFN9 424 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TMEM200CA6NKL6 621 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 A8MVM7 634 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF99A8MXY4 864 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms