RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 LANCL3Q6ZV70 420 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PARS2Q7L3T8 475 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC34A3Q8N130 599 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CERS5Q8N5B7 392 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 BCORP1Q8N888 145 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZSCAN4Q8NAM6 433 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ST6GALNAC3Q8NDV1 305 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR56A1Q8NGH5 318 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR1K1Q8NGR3 316 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4S2Q8NH73 311 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5R1Q8NH85 324 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 WDR36Q8NI36 951 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GNPDA2Q8TDQ7 276 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TBCKQ8TEA7 893 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF480Q8WV37 535 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM239Q8WW34 195 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RGP1Q92546 391 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 EMG1Q92979 244 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TOMM40LQ969M1 308 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CMBLQ96DG6 245 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MOCOSQ96EN8 888 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 WBP1Q96G27 269 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR2M2Q96R28 347 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SORT1Q99523 831 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NUDT22Q9BRQ3 303 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ULBP2Q9BZM5 246 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SIRPDQ9H106 197 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RNF122Q9H9V4 155 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 HHATLQ9HCP6 504 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ISYNA1Q9NPH2 558 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 POLE4Q9NR33 117 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NECAP2Q9NVZ3 263 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RNF14Q9UBS8 474 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4Q9UBX2 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FBXO5Q9UKT4 447 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NEU3Q9UQ49 428 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PDE10AQ9Y233 779 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PRSS21Q9Y6M0 314 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MYH15Q9Y2K3 1946 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ABCB11O95342 1321 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SPATA31A6Q5VVP1 1343 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GRIN2BQ13224 1484 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ARHGAP23Q9P227 1491 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DICER1Q9UPY3 1922 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A087WV48 116 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MBD3L4A6NDZ8 208 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MBD3L3A6NE82 208 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CGB1A6NKQ9 187 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 F2RL2O00254 374 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PCDH7O60245 1069 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RGS11O94810 467 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GLSO94925 669 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CBX6O95503 412 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 IGSF6O95976 241 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 HPP00738 406 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 HPRP00739 348 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 IGHV2-5P01817 119 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 APOC3P02656 99 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SERPINE2P07093 398 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CRYGBP07316 175 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FGF2P09038 288 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SNRPCP09234 159 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FCGR1AP12314 374 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 IL2RBP14784 551 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 AKR1C4P17516 323 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC2A5P22732 501 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ACRV1P26436 265 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NOS1P29475 1434 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ADORA1P30542 326 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CFHR2P36980 270 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 AVPR1AP37288 418 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR3A1P47881 315 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 LGALS7P47929 136 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CNN1P51911 297 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RAG2P55895 527 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 STXBP1P61764 594 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MRPS10P82664 201 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MC2RQ01718 297 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SRSF1Q07955 248 aaKnown RBP eCLIP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GPR50Q13585 617 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 KEAP1Q14145 624 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TAF13Q15543 124 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TNXAQ16473 311 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DGUOKQ16854 277 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUOXA1Q1HG43 343 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GAGE13Q4V321 117 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RABL3Q5HYI8 236 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PYY3Q5JQD4 70 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SAMD9Q5K651 1589 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC39A4Q6P5W5 647 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC27A1Q6PCB7 646 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM205Q6UW68 189 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DRAM2Q6UX65 266 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 GLDNQ6ZMI3 551 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CCDC190Q86UF4 302 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 LRRC28Q86X40 367 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 LGI3Q8N145 548 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 OR6V1Q8N148 313 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 AMER2Q8N7J2 671 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms