RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 OR6C65A6NJZ3 312 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 MCIDASD6RGH6 385 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF587BE7ETH6 402 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 CCNB2O95067 398 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 MPGP29372 298 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 ROR2Q01974 943 aaKnown RBP17.09■□□□□ 0.33
HDAC4-212ENST00000495497 TOP3AQ13472 1001 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-212ENST00000495497 GABRA6Q16445 453 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 TMEM179BQ7Z7N9 219 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 OR6N1Q8NGY5 312 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 OR6X1Q8NH79 312 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 GPR35Q9HC97 309 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF346Q9UL40 294 aaKnown RBP17.09■□□□□ 0.33
HDAC4-212ENST00000495497 SIGLEC7Q9Y286 467 aa17.09■□□□□ 0.33
HDAC4-212ENST00000495497 A0A1W2PR80 420 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 CYSRT1A8MQ03 144 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 GNGT2O14610 69 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 TIPRLO75663 272 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 GASTP01350 101 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 CSNK1A1P48729 337 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 FXYD6P3P58550 94 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 ERVK-25P63136 954 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 TLE4Q04727 773 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 TAB1Q15750 504 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 MICAQ29983 383 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 C1orf94Q6P1W5 598 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 THSD4Q6ZMP0 1018 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 WFDC8Q8IUA0 241 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 GNPDA2Q8TDQ7 276 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 ASB10Q8WXI3 467 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 ADAD1Q96M93 576 aaKnown RBP17.08■□□□□ 0.32
HDAC4-212ENST00000495497 TSPAN32Q96QS1 320 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 OR10A4Q9H209 315 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 TXNIPQ9H3M7 391 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 SLC24A3Q9HC58 644 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 CRLF2Q9HC73 371 aa17.08■□□□□ 0.32
HDAC4-212ENST00000495497 FLNBO75369 2602 aaKnown RBP17.07■□□□□ 0.32
HDAC4-212ENST00000495497 PKDREJQ9NTG1 2253 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 CASKO14936 926 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 PPP3CBP16298 524 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 RPL4P36578 427 aaKnown RBP17.07■□□□□ 0.32
HDAC4-212ENST00000495497 IFNGR2P38484 337 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 PRPS1P60891 318 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 CEACAM16Q2WEN9 425 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 ANKDD1AQ495B1 522 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 ARMC4Q5T2S8 1044 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 ZNF770Q6IQ21 691 aaPredicted RBP17.07■□□□□ 0.32
HDAC4-212ENST00000495497 HMBOX1Q6NT76 420 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 ABHD12BQ7Z5M8 362 aaPredicted RBP17.07■□□□□ 0.32
HDAC4-212ENST00000495497 TMEM54Q969K7 222 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 ZNF566Q969W8 418 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 SLC25A44Q96H78 314 aaPredicted RBP17.07■□□□□ 0.32
HDAC4-212ENST00000495497 LRR1Q96L50 414 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 KATNB1Q9BVA0 655 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 ADAM18Q9Y3Q7 739 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 CRYBG3Q68DQ2 2970 aa17.07■□□□□ 0.32
HDAC4-212ENST00000495497 A6NNC1 897 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 RPL36A-HNRNPH2H7BZ11 118 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 SIAH2O43255 324 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 TRMUO75648 421 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 SEC14L2O76054 403 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 NDUFB2O95178 105 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 PGA4P0DJD7 388 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 PGA3P0DJD8 388 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 FPR3P25089 353 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 ACVR1BP36896 505 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 GSSP48637 474 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 DAP3P51398 398 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 RPL27P61353 136 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 ARF1P84077 181 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 MYBPC1Q00872 1141 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 KPNB1Q14974 876 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 DAZAP2Q15038 168 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 HIKESHIQ53FT3 197 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 SYT14Q8NB59 555 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 AQP11Q8NBQ7 271 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 OR1K1Q8NGR3 316 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 OR52N5Q8NH56 324 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 HDAC2Q92769 488 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 C14orf79Q96F83 325 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 MUS81Q96NY9 551 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 POLDIP3Q9BY77 421 aaKnown RBP17.06■□□□□ 0.32
HDAC4-212ENST00000495497 ULBP2Q9BZM5 246 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 YY1AP1Q9H869 796 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 ZNF226Q9NYT6 803 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 GLTPQ9NZD2 209 aa17.06■□□□□ 0.32
HDAC4-212ENST00000495497 A0A096LPE4 126 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 A0A1W2PPZ6 126 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 OR5H1A6NKK0 313 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 IGHMP01871 453 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 ACADSP16219 412 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 HOXB6P17509 224 aaKnown RBP17.05■□□□□ 0.32
HDAC4-212ENST00000495497 CRYGSP22914 178 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 CLRN1P58418 232 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 KRTAP10-9P60411 292 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 TSPAN31Q12999 210 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 OR7E24Q6IFN5 339 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 LRFN4Q6PJG9 635 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 YTHDF3Q7Z739 585 aaKnown RBP17.05■□□□□ 0.32
HDAC4-212ENST00000495497 HS3ST5Q8IZT8 346 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms