RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 SAMD4AQ9UPU9 718 aaKnown RBP12.56□□□□□ -0.4
SCAP-213ENST00000494938 ITPR3Q14573 2671 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 PRRC2AP48634 2157 aaKnown RBP12.55□□□□□ -0.4
SCAP-213ENST00000494938 ARPC4-TTLL3A0A0A6YYG9 625 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 M0R1B8 84 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 ABCD4O14678 606 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 AKAP8O43823 692 aaKnown RBP12.55□□□□□ -0.4
SCAP-213ENST00000494938 GMNNO75496 209 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 DANCRP0C864 163 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 IFI30P13284 250 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 PTAFRP25105 342 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 SH3BGRP55822 239 aaPredicted RBP12.55□□□□□ -0.4
SCAP-213ENST00000494938 MXRA7P84157 204 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 VLDLRP98155 873 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 RUNX1T1Q06455 604 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 RPL18Q07020 188 aaKnown RBP12.55□□□□□ -0.4
SCAP-213ENST00000494938 LRFN4Q6PJG9 635 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 KLHL17Q6TDP4 642 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 TMEM108Q6UXF1 575 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 MBOAT2Q6ZWT7 520 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 NANOGNBQ7Z5D8 188 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 NRMQ8IXM6 262 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 RNF113BQ8IZP6 322 aaKnown RBP12.55□□□□□ -0.4
SCAP-213ENST00000494938 ACOT11Q8WXI4 607 aaPredicted RBP12.55□□□□□ -0.4
SCAP-213ENST00000494938 PIGTQ969N2 578 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 MAGEL2Q9UJ55 1249 aa12.55□□□□□ -0.4
SCAP-213ENST00000494938 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
SCAP-213ENST00000494938 A0A1W2PRQ8 180 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 ARPC2O15144 300 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 DIRAS1O95057 198 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 WNT11O96014 354 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 F13BP05160 661 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 RHCEP18577 417 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 CALB2P22676 271 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 HOXC12P31275 282 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 SPOCK1Q08629 439 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 DGCR6Q14129 220 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 MELKQ14680 651 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 PGGHGQ32M88 737 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 ZNF627Q7L945 461 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 KRTAP1-3Q8IUG1 177 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 BCAS4Q8TDM0 211 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 SMAP2Q8WU79 429 aaPredicted RBP12.54□□□□□ -0.4
SCAP-213ENST00000494938 SLC25A44Q96H78 314 aaPredicted RBP12.54□□□□□ -0.4
SCAP-213ENST00000494938 RADILQ96JH8 1075 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 DHRS1Q96LJ7 313 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 ADAD1Q96M93 576 aaKnown RBP12.54□□□□□ -0.4
SCAP-213ENST00000494938 TNFRSF13CQ96RJ3 184 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 CCL19Q99731 98 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 FUZQ9BT04 418 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
SCAP-213ENST00000494938 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 CRNNQ9UBG3 495 aaPredicted RBP12.54□□□□□ -0.4
SCAP-213ENST00000494938 MGAT4BQ9UQ53 548 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 HIF3AQ9Y2N7 669 aa12.54□□□□□ -0.4
SCAP-213ENST00000494938 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 IGHV1-18A0A0C4DH31 117 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 ZNF99A8MXY4 864 aaPredicted RBP12.53□□□□□ -0.4
SCAP-213ENST00000494938 E7EQL1 145 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 hCG_2039718K7EN88 272 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 BCL10O95999 233 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 CD8AP01732 235 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 H1F0P07305 194 aaKnown RBP12.53□□□□□ -0.4
SCAP-213ENST00000494938 SOD3P08294 240 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 PGA4P0DJD7 388 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 CSNK1A1P48729 337 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 TUBA1BP68363 451 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 TUBA4AP68366 448 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 ADAM8P78325 824 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 HIST3H3Q16695 136 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 ARMC4Q5T2S8 1044 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 ZNF730Q6ZMV8 503 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 TUBA1AQ71U36 451 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 CYP4Z1Q86W10 505 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 LRRC75AQ8NAA5 344 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 NSMCE2Q96MF7 247 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 ANKRD19PQ9H560 264 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 INIPQ9NRY2 104 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 B3GNT2Q9NY97 397 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 TAS2R1Q9NYW7 299 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 CISD1Q9NZ45 108 aaKnown RBP12.53□□□□□ -0.4
SCAP-213ENST00000494938 FAM32AQ9Y421 112 aaKnown RBP12.53□□□□□ -0.4
SCAP-213ENST00000494938 MAGED1Q9Y5V3 778 aaPredicted RBP12.53□□□□□ -0.4
SCAP-213ENST00000494938 V9GYQ6 96 aa12.53□□□□□ -0.4
SCAP-213ENST00000494938 TEP1Q99973 2627 aaKnown RBP12.52□□□□□ -0.4
SCAP-213ENST00000494938 A0A1W2PRG6 482 aa12.52□□□□□ -0.41
SCAP-213ENST00000494938 OVOL3O00110 214 aa12.52□□□□□ -0.41
SCAP-213ENST00000494938 CDC42EP2O14613 210 aa12.52□□□□□ -0.41
SCAP-213ENST00000494938 SMPD2O60906 423 aa12.52□□□□□ -0.41
SCAP-213ENST00000494938 PTP4A3O75365 173 aa12.52□□□□□ -0.41
SCAP-213ENST00000494938 TRMUO75648 421 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms