RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 RPL18Q07020 188 aaKnown RBP11.89□□□□□ -0.51
PDCD11-206ENST00000493610 MELKQ14680 651 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 HIST3H3Q16695 136 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 Q5PR19 223 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 C1QTNF12Q5T7M4 302 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 TMEM108Q6UXF1 575 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 SLC35D2Q76EJ3 337 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 ABHD12BQ7Z5M8 362 aaPredicted RBP11.89□□□□□ -0.51
PDCD11-206ENST00000493610 PGAM4Q8N0Y7 254 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
PDCD11-206ENST00000493610 PIK3C3Q8NEB9 887 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 OR6X1Q8NH79 312 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 NMD3Q96D46 503 aaKnown RBP11.89□□□□□ -0.51
PDCD11-206ENST00000493610 PERPQ96FX8 193 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 FUZQ9BT04 418 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 MRPL13Q9BYD1 178 aaKnown RBP11.89□□□□□ -0.51
PDCD11-206ENST00000493610 SPAG4Q9NPE6 437 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 DCAF13Q9NV06 445 aaKnown RBP11.89□□□□□ -0.51
PDCD11-206ENST00000493610 TAGLN3Q9UI15 199 aa11.89□□□□□ -0.51
PDCD11-206ENST00000493610 A0A087WUU8 490 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 ZNF99A8MXY4 864 aaPredicted RBP11.88□□□□□ -0.51
PDCD11-206ENST00000493610 ATP6V1G2-DDX39BF2Z307 99 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 SERPINI2O75830 405 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 KRT33AO76009 404 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 ZNF682O95780 498 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 CECR9P0C854 216 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 PGA4P0DJD7 388 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 PGA3P0DJD8 388 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 T-ENOLP0DO92 83 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 HSD17B1P14061 328 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 CALCRP30988 508 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 AQP2P41181 271 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 SH3BGRP55822 239 aaPredicted RBP11.88□□□□□ -0.51
PDCD11-206ENST00000493610 RPS4XP62701 263 aaKnown RBP11.88□□□□□ -0.51
PDCD11-206ENST00000493610 IL1RL1Q01638 556 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 MST1LQ2TV78 715 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 IFI44LQ53G44 452 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 ARMC4Q5T2S8 1044 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 HMBOX1Q6NT76 420 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 TBPL2Q6SJ96 375 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 PRSS57Q6UWY2 283 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 PIAS4Q8N2W9 510 aaPredicted RBP11.88□□□□□ -0.51
PDCD11-206ENST00000493610 GPR137CQ8N3F9 429 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 GEMIN6Q8WXD5 167 aaKnown RBP11.88□□□□□ -0.51
PDCD11-206ENST00000493610 ASB10Q8WXI3 467 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 HS6ST2Q96MM7 605 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 LRRC37BQ96QE4 947 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 GRIP2Q9C0E4 1043 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 GSX1Q9H4S2 264 aaPredicted RBP11.88□□□□□ -0.51
PDCD11-206ENST00000493610 OBP2BQ9NPH6 170 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 NDUFAF4Q9P032 175 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 MGAT4BQ9UQ53 548 aa11.88□□□□□ -0.51
PDCD11-206ENST00000493610 IGKV1D-43A0A0B4J1Z2 117 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 CDC42EP2O14613 210 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 TMCC2O75069 709 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 IFNW1P05000 195 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 F13BP05160 661 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
PDCD11-206ENST00000493610 CDKN1AP38936 164 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 ZNF133P52736 654 aaPredicted RBP11.87□□□□□ -0.51
PDCD11-206ENST00000493610 VLDLRP98155 873 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 HGFACQ04756 655 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 PRKCDQ05655 676 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 ST3GAL3Q11203 375 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 KRT72Q14CN4 511 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 C3orf36Q3SXR2 165 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 KLHL17Q6TDP4 642 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 KLHL24Q6TFL4 600 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 NANOGNBQ7Z5D8 188 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 TMEM171Q8WVE6 324 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 LZICQ8WZA0 190 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 HTRA1Q92743 480 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 SLC38A2Q96QD8 506 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 SMR3AQ99954 134 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 GORASP2Q9H8Y8 452 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 MOKQ9UQ07 419 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 HIF3AQ9Y2N7 669 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 MED31Q9Y3C7 131 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 ENPP4Q9Y6X5 453 aa11.87□□□□□ -0.51
PDCD11-206ENST00000493610 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 TRIM64A6NGJ6 449 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 TRIM64BA6NI03 449 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 BLOC1S5-TXNDC5H3BN57 136 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 GSTA4O15217 222 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 RNF13O43567 381 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 AKAP8O43823 692 aaKnown RBP11.86□□□□□ -0.51
PDCD11-206ENST00000493610 FAM107AO95990 144 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 WNT11O96014 354 aa11.86□□□□□ -0.51
PDCD11-206ENST00000493610 IFI30P13284 250 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms