RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RFXANKO14593 260 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 HNRNPCL1O60812 293 aaKnown RBP15.09■□□□□ 0.01
NUP50-218ENST00000493456 IGHV2-5P01817 119 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 SERPINE1P05121 402 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 HNRNPCL4P0DMR1 293 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 B4GALT1P15291 398 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 ADRA2CP18825 462 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 FPR2P25090 351 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 MAGEB1P43366 347 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 RPL14P50914 215 aaKnown RBP15.09■□□□□ 0.01
NUP50-218ENST00000493456 MVDP53602 400 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 ABCE1P61221 599 aaKnown RBP15.09■□□□□ 0.01
NUP50-218ENST00000493456 UFM1P61960 85 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 DEFA6Q01524 100 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 MVKQ03426 396 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 RGS7BPQ6MZT1 257 aaPredicted RBP15.09■□□□□ 0.01
NUP50-218ENST00000493456 TMEM154Q6P9G4 183 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 LRRC17Q8N6Y2 441 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 SNX33Q8WV41 574 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 TAAR8Q969N4 342 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 FOXB1Q99853 325 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 ULBP2Q9BZM5 246 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 HINT3Q9NQE9 182 aaKnown RBP15.09■□□□□ 0.01
NUP50-218ENST00000493456 NKIRAS2Q9NYR9 191 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 CORINQ9Y5Q5 1042 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 VWFP04275 2813 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 SLC22A23A1A5C7 686 aa15.08■□□□□ 0
NUP50-218ENST00000493456 PRSS23O95084 383 aa15.08■□□□□ 0
NUP50-218ENST00000493456 FSHBP01225 129 aa15.08■□□□□ 0
NUP50-218ENST00000493456 ETFAP13804 333 aa15.08■□□□□ 0
NUP50-218ENST00000493456 NQO1P15559 274 aaKnown RBP15.08■□□□□ 0
NUP50-218ENST00000493456 CRATP43155 626 aa15.08■□□□□ 0
NUP50-218ENST00000493456 NME5P56597 212 aa15.08■□□□□ 0
NUP50-218ENST00000493456 DSTNP60981 165 aa15.08■□□□□ 0
NUP50-218ENST00000493456 ZP4Q12836 540 aa15.08■□□□□ 0
NUP50-218ENST00000493456 CAMK2DQ13557 499 aa15.08■□□□□ 0
NUP50-218ENST00000493456 RPS26P11Q5JNZ5 115 aaPredicted RBP15.08■□□□□ 0
NUP50-218ENST00000493456 AVPI1Q5T686 147 aa15.08■□□□□ 0
NUP50-218ENST00000493456 TREML4Q6UXN2 200 aa15.08■□□□□ 0
NUP50-218ENST00000493456 SCAIQ8N9R8 606 aa15.08■□□□□ 0
NUP50-218ENST00000493456 OR6S1Q8NH40 331 aa15.08■□□□□ 0
NUP50-218ENST00000493456 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.08■□□□□ 0
NUP50-218ENST00000493456 TMEM19Q96HH6 336 aa15.08■□□□□ 0
NUP50-218ENST00000493456 ZBTB18Q99592 522 aa15.08■□□□□ 0
NUP50-218ENST00000493456 NUF2Q9BZD4 464 aa15.08■□□□□ 0
NUP50-218ENST00000493456 ZMAT3Q9HA38 289 aaKnown RBP15.08■□□□□ 0
NUP50-218ENST00000493456 AIG1Q9NVV5 245 aa15.08■□□□□ 0
NUP50-218ENST00000493456 SLCO1C1Q9NYB5 712 aa15.08■□□□□ 0
NUP50-218ENST00000493456 TAAR3PQ9P1P4 343 aa15.08■□□□□ 0
NUP50-218ENST00000493456 IGLV3-9A0A075B6K5 115 aa15.07■□□□□ 0
NUP50-218ENST00000493456 IGHV1-69-2A0A0G2JMI3 117 aa15.07■□□□□ 0
NUP50-218ENST00000493456 CLDN25C9JDP6 229 aa15.07■□□□□ 0
NUP50-218ENST00000493456 MS4A18H0YCH9 400 aa15.07■□□□□ 0
NUP50-218ENST00000493456 TYROBPO43914 113 aa15.07■□□□□ 0
NUP50-218ENST00000493456 CDC14BO60729 498 aa15.07■□□□□ 0
NUP50-218ENST00000493456 ENTPD5O75356 428 aa15.07■□□□□ 0
NUP50-218ENST00000493456 SERPINA5P05154 406 aa15.07■□□□□ 0
NUP50-218ENST00000493456 ALDOCP09972 364 aaKnown RBP15.07■□□□□ 0
NUP50-218ENST00000493456 IL12AP29459 219 aa15.07■□□□□ 0
NUP50-218ENST00000493456 CRYBB2P43320 205 aa15.07■□□□□ 0
NUP50-218ENST00000493456 RAD52P43351 418 aa15.07■□□□□ 0
NUP50-218ENST00000493456 AQP5P55064 265 aa15.07■□□□□ 0
NUP50-218ENST00000493456 KLF3P57682 345 aaPredicted RBP15.07■□□□□ 0
NUP50-218ENST00000493456 CCL8P80075 99 aa15.07■□□□□ 0
NUP50-218ENST00000493456 HOXC5Q00444 222 aa15.07■□□□□ 0
NUP50-218ENST00000493456 RAB39AQ14964 217 aa15.07■□□□□ 0
NUP50-218ENST00000493456 MS4A18Q3C1V0 323 aa15.07■□□□□ 0
NUP50-218ENST00000493456 ALKBH6Q3KRA9 238 aa15.07■□□□□ 0
NUP50-218ENST00000493456 PDCD4Q53EL6 469 aaKnown RBP15.07■□□□□ 0
NUP50-218ENST00000493456 RBMS3Q6XE24 437 aaKnown RBP15.07■□□□□ 0
NUP50-218ENST00000493456 TREML1Q86YW5 311 aa15.07■□□□□ 0
NUP50-218ENST00000493456 ZNF584Q8IVC4 421 aa15.07■□□□□ 0
NUP50-218ENST00000493456 LSMEM1Q8N8F7 131 aa15.07■□□□□ 0
NUP50-218ENST00000493456 GLB1L3Q8NCI6 653 aaPredicted RBP15.07■□□□□ 0
NUP50-218ENST00000493456 OR6N1Q8NGY5 312 aa15.07■□□□□ 0
NUP50-218ENST00000493456 RNF217Q8TC41 542 aa15.07■□□□□ 0
NUP50-218ENST00000493456 DNAJA4Q8WW22 397 aaPredicted RBP15.07■□□□□ 0
NUP50-218ENST00000493456 SLC41A3Q96GZ6 507 aa15.07■□□□□ 0
NUP50-218ENST00000493456 TIMD4Q96H15 378 aa15.07■□□□□ 0
NUP50-218ENST00000493456 PKNOX2Q96KN3 472 aa15.07■□□□□ 0
NUP50-218ENST00000493456 EMC6Q9BV81 110 aa15.07■□□□□ 0
NUP50-218ENST00000493456 C7orf69Q9H7B7 122 aa15.07■□□□□ 0
NUP50-218ENST00000493456 MEAF6Q9HAF1 191 aa15.07■□□□□ 0
NUP50-218ENST00000493456 KLHL14Q9P2G3 628 aa15.07■□□□□ 0
NUP50-218ENST00000493456 HAO1Q9UJM8 370 aa15.07■□□□□ 0
NUP50-218ENST00000493456 PPIAL4AQ9Y536 164 aa15.07■□□□□ 0
NUP50-218ENST00000493456 A0A087WUJ7 227 aa15.06■□□□□ 0
NUP50-218ENST00000493456 HPRP00739 348 aa15.06■□□□□ 0
NUP50-218ENST00000493456 HLA-DOBP13765 273 aa15.06■□□□□ 0
NUP50-218ENST00000493456 ZNF250P15622 560 aa15.06■□□□□ 0
NUP50-218ENST00000493456 PIWIL3Q7Z3Z3 882 aaKnown RBP15.06■□□□□ 0
NUP50-218ENST00000493456 EPYCQ99645 322 aa15.06■□□□□ 0
NUP50-218ENST00000493456 ASPNQ9BXN1 380 aa15.06■□□□□ 0
NUP50-218ENST00000493456 C20orf27Q9GZN8 174 aa15.06■□□□□ 0
NUP50-218ENST00000493456 TPT1P8Q9HAU6 139 aa15.06■□□□□ 0
NUP50-218ENST00000493456 MED29Q9NX70 200 aa15.06■□□□□ 0
NUP50-218ENST00000493456 WIPI2Q9Y4P8 454 aa15.06■□□□□ 0
NUP50-218ENST00000493456 IGKV1D-42A0A075B6H8 117 aa15.05■□□□□ -0
NUP50-218ENST00000493456 A0A0G2JK05 382 aa15.05■□□□□ -0
NUP50-218ENST00000493456 ZNF726A6NNF4 738 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms