RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 FAM231BA6NCW3 169 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 A6NIZ1 184 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 HSBP1L1C9JCN9 74 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 EIF4E2O60573 245 aaKnown RBP3.64□□□□□ -1.83
VPS13A-212ENST00000493341 SOGA1O94964 1423 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 FGF1P05230 155 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 STSP08842 583 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PGAM2P15259 253 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PMCHP20382 165 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 CD9P21926 228 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PRKACBP22694 351 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 CLDN18P56856 261 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 RAP1BP61224 184 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 ACTA2P62736 377 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 ACTG2P63267 376 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 ACTC1P68032 377 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 ACTA1P68133 377 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PAX8Q06710 450 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 ECH1Q13011 328 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 AANATQ16613 207 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 C1orf94Q6P1W5 598 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 DNM1P46Q6ZS02 220 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 MRPL21Q7Z2W9 205 aaKnown RBP3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PIANPQ8IYJ0 282 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 GPR65Q8IYL9 337 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 FAM58AQ8N1B3 248 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 CADM2Q8N3J6 435 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 C8orf31Q8N9H6 132 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 INO80EQ8NBZ0 244 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-212ENST00000493341 LRRC20Q8TCA0 184 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 RARRES2Q99969 163 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PELOQ9BRX2 385 aaKnown RBP3.64□□□□□ -1.83
VPS13A-212ENST00000493341 PIGUQ9H490 435 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 CWH43Q9H720 699 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 LY9Q9HBG7 655 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 HRASLS2Q9NWW9 162 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 KPTNQ9Y664 436 aa3.64□□□□□ -1.83
VPS13A-212ENST00000493341 SYNJ1O43426 1573 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 ZNF99A8MXY4 864 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 K7ERQ8 282 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 ZBTB5O15062 677 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 POLR1CO15160 346 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 EEDO75530 441 aaKnown RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 HLA-HP01893 362 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 SERPINA5P05154 406 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 ACSM4P0C7M7 580 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 IGLL1P15814 213 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CXCR2P25025 360 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RORAP35398 523 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 LCN2P80188 198 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 PDIA2Q13087 525 aaKnown RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RCAN2Q14206 197 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 GPR107Q5VW38 600 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 ZNF772Q68DY9 489 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 MBOAT1Q6ZNC8 495 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RDH10Q8IZV5 341 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 FAM86B1Q8N7N1 296 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 FBXO36Q8NEA4 188 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 APH1AQ96BI3 265 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 MED8Q96G25 268 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 OR5B12Q96R08 314 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 HES7Q9BYE0 225 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 ACTR3CQ9C0K3 210 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 PANK3Q9H999 370 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 AGPAT4Q9NRZ5 378 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RSPH14Q9UHP6 348 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 KLHL21Q9UJP4 597 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 GRIN2BQ13224 1484 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 IGHV3OR16-10A0A075B7F0 116 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 IGHV1OR21-1A0A087WYE8 117 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 PRSS37A4D1T9 235 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RBMY1BA6NDE4 496 aaKnown RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RBMY1EA6NEQ0 496 aaKnown RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CDC7O00311 574 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CDX4O14627 284 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 GPAA1O43292 621 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 EDIL3O43854 480 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 GALR3O60755 368 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 ZG16O60844 167 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CD160O95971 181 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 KRT16P08779 473 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RBMY1DP0C7P1 496 aaKnown RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 RBMY1A1P0DJD3 496 aaKnown RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 NR2C1P13056 603 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 NTSP30990 170 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 TFPI2P48307 235 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 BCL2L1Q07817 233 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CD47Q08722 323 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CDH17Q12864 832 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 KLF17Q5JT82 389 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-212ENST00000493341 H3F3CQ6NXT2 135 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CXCL17Q6UXB2 119 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CERS6Q6ZMG9 384 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 C18orf65Q6ZTR6 163 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 CMC1Q7Z7K0 106 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 LHFPL3Q86UP9 236 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 MYOCDQ8IZQ8 938 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 SYCE1Q8N0S2 351 aa3.63□□□□□ -1.83
VPS13A-212ENST00000493341 OPALINQ96PE5 141 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms