RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 IFT27Q9BW83 186 aa20.62■□□□□ 0.89
USF3-203ENST00000491165 TMEM5Q9Y2B1 443 aa20.62■□□□□ 0.89
USF3-203ENST00000491165 CPAMD8Q8IZJ3 1885 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 REM1O75628 298 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 LYPD3O95274 346 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 SERPINA7P05543 415 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 DCAF7P61962 342 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 GALK2Q01415 458 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 OR4M1Q8NGD0 313 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 RFT1Q96AA3 541 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 IP6K3Q96PC2 410 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 DCBLD2Q96PD2 775 aa20.61■□□□□ 0.89
USF3-203ENST00000491165 PPIL3Q9H2H8 161 aaKnown RBP20.61■□□□□ 0.89
USF3-203ENST00000491165 CDHR4A6H8M9 788 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 TO15178 435 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 PLPP2O43688 288 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 FMO6PO60774 539 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 EIF4EP06730 217 aaKnown RBP20.6■□□□□ 0.89
USF3-203ENST00000491165 ICAM2P13598 275 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 PRKCAP17252 672 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 THBS2P35442 1172 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 SLC16A1P53985 500 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 RAB25P57735 213 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 TAS2R43P59537 309 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 MAB21L1Q13394 359 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 GPR176Q14439 515 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 BICRALQ6AI39 1079 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 SFXN4Q6P4A7 337 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 IL20RBQ6UXL0 311 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 TMPRSS11FQ6ZWK6 438 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 SAMD12Q8N8I0 201 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 OR13C2Q8NGS9 318 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 AKAP1Q92667 903 aaKnown RBP eCLIP20.6■□□□□ 0.89
USF3-203ENST00000491165 PTP4A1Q93096 173 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 BPIFA2Q96DR5 249 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 RASL10BQ96S79 203 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 TEAD3Q99594 435 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 THAP7Q9BT49 309 aaPredicted RBP20.6■□□□□ 0.89
USF3-203ENST00000491165 CDCP1Q9H5V8 836 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 ITGA10O75578 1167 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 SLC6A1P30531 599 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 AGFG1P52594 562 aaKnown RBP20.6■□□□□ 0.89
USF3-203ENST00000491165 LYPD8Q6UX82 237 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 THSD4Q6ZMP0 1018 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 OAFQ86UD1 273 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 TPRA1Q86W33 373 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 OR5L2Q8NGL0 311 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 OMA1Q96E52 524 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 ADOQ96SZ5 270 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 OR51V1Q9H2C8 321 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 GALNT9Q9HCQ5 603 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 RASD1Q9Y272 281 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 MED31Q9Y3C7 131 aa20.6■□□□□ 0.89
USF3-203ENST00000491165 ZNF780AO75290 641 aaPredicted RBP20.59■□□□□ 0.89
USF3-203ENST00000491165 SAGP10523 405 aaPredicted RBP20.59■□□□□ 0.89
USF3-203ENST00000491165 PITPNBP48739 271 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 BTG1P62324 171 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 H3F3CQ6NXT2 135 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 OR4C3Q8NH37 302 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 THAP4Q8WY91 577 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 SIGLEC7Q9Y286 467 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 RAXQ9Y2V3 346 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 NPFFR2Q9Y5X5 522 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 RIIAD1A6NNX1 92 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 ZNF891A8MT65 544 aaPredicted RBP20.59■□□□□ 0.89
USF3-203ENST00000491165 E9PI62 339 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 TSPAN2O60636 221 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 PAHP00439 452 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 MRPL3P09001 348 aaKnown RBP20.59■□□□□ 0.89
USF3-203ENST00000491165 NPR2P20594 1047 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 SLC3A1Q07837 685 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 PLCXD2Q0VAA5 305 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 MRPL28Q13084 256 aaKnown RBP20.59■□□□□ 0.89
USF3-203ENST00000491165 FAM27D1Q5T7N8 215 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 ASB18Q6ZVZ8 466 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 CEACAM19Q7Z692 300 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 FER1L6-AS2Q96M78 137 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 SLC35A3Q9Y2D2 325 aa20.59■□□□□ 0.89
USF3-203ENST00000491165 LANCL1O43813 399 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 IL33O95760 270 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 SBK2P0C263 348 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 ITGA3P26006 1051 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 ITPKBP27987 946 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 OR10A3P58181 314 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 GNG2P59768 71 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 AIMP2Q13155 320 aaKnown RBP20.58■□□□□ 0.89
USF3-203ENST00000491165 ZNF468Q5VIY5 522 aaPredicted RBP20.58■□□□□ 0.89
USF3-203ENST00000491165 RPS19BP1Q86WX3 136 aaKnown RBP20.58■□□□□ 0.89
USF3-203ENST00000491165 ARMC10Q8N2F6 343 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 CLEC1AQ8NC01 280 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 ABHD4Q8TB40 342 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 C4orf36Q96KX1 117 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 ZMIZ1Q9ULJ6 1067 aa20.58■□□□□ 0.89
USF3-203ENST00000491165 PTPRQQ9UMZ3 2332 aa20.58■□□□□ 0.88
USF3-203ENST00000491165 AK1P00568 194 aa20.57■□□□□ 0.88
USF3-203ENST00000491165 FBXW4P57775 412 aa20.57■□□□□ 0.88
USF3-203ENST00000491165 TLE3Q04726 772 aa20.57■□□□□ 0.88
USF3-203ENST00000491165 DBPQ10586 325 aaPredicted RBP20.57■□□□□ 0.88
USF3-203ENST00000491165 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.57■□□□□ 0.88
USF3-203ENST00000491165 ABCG5Q9H222 651 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms