RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 CACNA1CQ13936 2221 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 A0A1W2PR80 420 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 A0A1W2PRG6 482 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 HTR3EA5X5Y0 456 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 ZNF726A6NNF4 738 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 H7C1C5 153 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 M0R3G1 203 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 PDLIM1O00151 329 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 HNRNPRO43390 633 aaKnown RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 MITFO75030 526 aaPredicted RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 SLC43A1O75387 559 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 TRMUO75648 421 aaKnown RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 SEC14L2O76054 403 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 NDUFB2O95178 105 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 PPP1R3DO95685 299 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 BCL10O95999 233 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 TP53P04637 393 aaPredicted RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 CD14P08571 375 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 ITGA5P08648 1049 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 ZNF23P17027 643 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 UGT2B10P36537 528 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 IFNGR2P38484 337 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 DAPP51397 102 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 LCN6P62502 163 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 FBXL19-AS1Q494R0 122 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 ARMC4Q5T2S8 1044 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 SP5Q6BEB4 398 aaPredicted RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 ALKBH2Q6NS38 261 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 SHQ1Q6PI26 577 aaKnown RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 SMARCD3Q6STE5 483 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 ZNF620Q6ZNG0 422 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 Q6ZT83 130 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 BEND4Q6ZU67 534 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 STK32CQ86UX6 486 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 C20orf196Q8IYI0 205 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 OR5K1Q8NHB7 308 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 FANK1Q8TC84 345 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 HTRA1Q92743 480 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 HDAC2Q92769 488 aaKnown RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 RASD2Q96D21 266 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 Q96M85 177 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 POLDIP3Q9BY77 421 aaKnown RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 SLCO5A1Q9H2Y9 848 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 TXNIPQ9H3M7 391 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 SMURF2Q9HAU4 748 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 KRCC1Q9NPI7 259 aaPredicted RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 PARPBPQ9NWS1 579 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 UPB1Q9UBR1 384 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 RCE1Q9Y256 329 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 IER3IP1Q9Y5U9 82 aa7.3□□□□□ -1.24
SF1-218ENST00000489544 KLF2Q9Y5W3 355 aaPredicted RBP7.3□□□□□ -1.24
SF1-218ENST00000489544 IGKV1D-43A0A0B4J1Z2 117 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 TEX13CA0A0J9YWL9 993 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 G3V2T6 193 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 RAD51DO75771 328 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 KRT33AO76009 404 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 BAG2O95816 211 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 PGA4P0DJD7 388 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 PGA3P0DJD8 388 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 FCGR1AP12314 374 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ACADSP16219 412 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 HOXB6P17509 224 aaKnown RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 IGFBP2P18065 325 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 COX5AP20674 150 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ACVR1BP36896 505 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 CSNK1A1P48729 337 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 PRPS1P60891 318 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 RPL27P61353 136 aaKnown RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 ROR2Q01974 943 aaKnown RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 FMODQ06828 376 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 RFX4Q33E94 735 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 SLC36A3Q495N2 470 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 MESTQ5EB52 335 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 SLC35F1Q5T1Q4 408 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 SFRP5Q5T4F7 317 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 OTPQ5XKR4 325 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ZFP1Q6P2D0 407 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 LRFN4Q6PJG9 635 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 MEX3BQ6ZN04 569 aaKnown RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 RASSF6Q6ZTQ3 369 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 PTCHD4Q6ZW05 846 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ZNF771Q7L3S4 317 aaPredicted RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 FAM122BQ7Z309 247 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 GPR137CQ8N3F9 429 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 IQCF1Q8N6M8 205 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ZNF433Q8N7K0 673 aaPredicted RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 ATG16L2Q8NAA4 619 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 OR6N1Q8NGY5 312 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 OR4Q3Q8NH05 313 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 OR6X1Q8NH79 312 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ZNF519Q8TB69 540 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ZNF566Q969W8 418 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 S100PBPQ96BU1 408 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 CENPNQ96H22 339 aaPredicted RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 ZC3HAV1LQ96H79 300 aaKnown RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 WFIKKN1Q96NZ8 548 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 ERMAPQ96PL5 475 aaPredicted RBP7.29□□□□□ -1.24
SF1-218ENST00000489544 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
SF1-218ENST00000489544 DGCR6LQ9BY27 220 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms