RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RHCGQ9UBD6 479 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 CRNNQ9UBG3 495 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 LAMP3Q9UQV4 416 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 MAGED1Q9Y5V3 778 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 ENPP4Q9Y6X5 453 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 USF3Q68DE3 2245 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF503-AS2A6NEH8 195 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF99A8MXY4 864 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 BLOC1S5-TXNDC5H3BN57 136 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 RNF13O43567 381 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 CD8AP01732 235 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 UMPSP11172 480 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 AQP2P41181 271 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 RPL18Q07020 188 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 IQCCQ4KMZ1 466 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 LRFN4Q6PJG9 635 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 KLHL24Q6TFL4 600 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 B3GLCTQ6Y288 498 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 NANOGNBQ7Z5D8 188 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 FAM169BQ8N8A8 192 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 MOSPD2Q8NHP6 518 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 TMEM171Q8WVE6 324 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 C7orf34Q96L11 122 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 ADAD1Q96M93 576 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 CDRT15Q96T59 188 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 FNDC11Q9BVV2 318 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 DLL4Q9NR61 685 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 NDUFAF4Q9P032 175 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 RPS6KA6Q9UK32 745 aa13.91□□□□□ -0.18
CTDSP1-209ENST00000488627 ARID1AO14497 2285 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 A0A087WUU8 490 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 IGHV1-18A0A0C4DH31 117 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 HTR3EA5X5Y0 456 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 IGLV1-44P01699 117 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 CD99P14209 185 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 TCN1P20061 433 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 MAKP20794 623 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 PAX7P23759 505 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 MSX2P35548 267 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 PTH2RP49190 550 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 CDH11P55287 796 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 TUBA1BP68363 451 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 TUBA4AP68366 448 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 RUNX1T1Q06455 604 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 FHL1Q13642 323 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 TRAM2Q15035 370 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 SAMD4BQ5PRF9 694 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 GKAP1Q5VSY0 366 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 SHEQ5VZ18 495 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 SLC22A25Q6T423 547 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 PRSS57Q6UWY2 283 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 TUBA1AQ71U36 451 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 DTX2Q86UW9 622 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 NRMQ8IXM6 262 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 OR6N1Q8NGY5 312 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 BPIFA2Q96DR5 249 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 SLC25A44Q96H78 314 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 SEPHS2Q99611 448 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 GRIP2Q9C0E4 1043 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 NMNAT1Q9HAN9 279 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 GLTPQ9NZD2 209 aa13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 MAP1AP78559 2803 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-209ENST00000488627 VPS13CQ709C8 3753 aa13.9□□□□□ -0.19
CTDSP1-209ENST00000488627 SEC14L2O76054 403 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 BCL10O95999 233 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 IGKV3-15P01624 115 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 F13BP05160 661 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 T-ENOLP0DO92 83 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 IFI30P13284 250 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 CBR1P16152 277 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 IFNA8P32881 189 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 RPS4XP62701 263 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 PRKCDQ05655 676 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 MELKQ14680 651 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 HIST3H3Q16695 136 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 C3orf36Q3SXR2 165 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 TBPL2Q6SJ96 375 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 MEX3DQ86XN8 651 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 DEFB107AQ8IZN7 70 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 RNF113BQ8IZP6 322 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 ACOT11Q8WXI4 607 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 PERPQ96FX8 193 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 NSL1Q96IY1 281 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 TRAF4Q9BUZ4 470 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 MRPL13Q9BYD1 178 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 ULBP2Q9BZM5 246 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 CXorf56Q9H5V9 222 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 B3GAT2Q9NPZ5 323 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 B3GNT2Q9NY97 397 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 HIF3AQ9Y2N7 669 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 DSCAMO60469 2012 aa13.89□□□□□ -0.19
CTDSP1-209ENST00000488627 ACANP16112 2415 aa13.88□□□□□ -0.19
CTDSP1-209ENST00000488627 ARHGEF9O43307 516 aa13.88□□□□□ -0.19
CTDSP1-209ENST00000488627 SEMG1P04279 462 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms