RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ARPC2O15144 300 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 HOXA3O43365 443 aaPredicted RBP9.92□□□□□ -0.82
TRIM56-204ENST00000487252 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
TRIM56-204ENST00000487252 KCNH1O95259 989 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 KRT6AP02538 564 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 KRT6BP04259 564 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 UBTFL6P0CB48 400 aaPredicted RBP9.92□□□□□ -0.82
TRIM56-204ENST00000487252 UMPSP11172 480 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 GABRA3P34903 492 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 MPIP34949 423 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 ASMTP46597 345 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 KRT6CP48668 564 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 TBRG1Q3YBR2 411 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 RABL3Q5HYI8 236 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 AVPI1Q5T686 147 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 FRG2Q64ET8 278 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 CBLN3Q6UW01 205 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 CYP2R1Q6VVX0 501 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 ZAR1Q86SH2 424 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 OR8J3Q8NGG0 315 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 GPR119Q8TDV5 335 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 CANT1Q8WVQ1 401 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 LRTOMTQ8WZ04 291 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 ARL5BQ96KC2 179 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 FCRL1Q96LA6 429 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 FRG2BQ96QU4 278 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 OR5B2Q96R09 309 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 CGREF1Q99674 301 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 MRPL37Q9BZE1 423 aaKnown RBP9.92□□□□□ -0.82
TRIM56-204ENST00000487252 SLC35C2Q9NQQ7 365 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 C1orf109Q9NX04 203 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 POLR3KQ9Y2Y1 108 aaPredicted RBP9.92□□□□□ -0.82
TRIM56-204ENST00000487252 TRBV5-3A0A0A0MS03 114 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 IGHV2OR16-5A0A0B4J2B6 119 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 DHRS12A0PJE2 317 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 OIP5O43482 229 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 TRAF3IP2O43734 574 aaPredicted RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 IL6P05231 212 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 CRYBA1P05813 215 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 PRPS2P11908 318 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 LCN1P31025 176 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 TIA1P31483 386 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 SUMO3P55854 103 aaPredicted RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 RPL15P61313 204 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 RPL38P63173 70 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 CSNK2A1P68400 391 aaPredicted RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 LCN2P80188 198 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 MVKQ03426 396 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 INTS11Q5TA45 600 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 FAM205BPQ63HN1 556 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 C3orf33Q6P1S2 294 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 SLC2A7Q6PXP3 512 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 FIP1L1Q6UN15 594 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 PIK3R3Q92569 461 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 EXOSC8Q96B26 276 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 KTI12Q96EK9 354 aaPredicted RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 CCDC115Q96NT0 180 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 ZBTB18Q99592 522 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 KCTD14Q9BQ13 255 aaPredicted RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 ACPTQ9BZG2 426 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 FAM192AQ9GZU8 254 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 MS4A7Q9GZW8 240 aaPredicted RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 MOV10Q9HCE1 1003 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 C8orf4Q9NR00 106 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 MMP26Q9NRE1 261 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 UBQLN4Q9NRR5 601 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 FARSBQ9NSD9 589 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 UBAP1Q9NZ09 502 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 SLAMF8Q9P0V8 285 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 UPB1Q9UBR1 384 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 PURGQ9UJV8 347 aaKnown RBP9.91□□□□□ -0.82
TRIM56-204ENST00000487252 SNX6Q9UNH7 406 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 AP3M1Q9Y2T2 418 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 CMAHPQ9Y471 501 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 AUP1Q9Y679 476 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 HERC2O95714 4834 aa9.91□□□□□ -0.82
TRIM56-204ENST00000487252 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 OR6C65A6NJZ3 312 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 MYO1GB0I1T2 1018 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 C3orf84H3BNL1 204 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 DHHO43323 396 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 NKX2-2O95096 273 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 GPANK1O95872 356 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 PLATP00750 562 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 PDYNP01213 254 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 CELA3BP08861 270 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 FAM157BP0CG42 384 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 FCGR1AP12314 374 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 BCKDHAP12694 445 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 HOXB9P17482 250 aaPredicted RBP9.9□□□□□ -0.82
TRIM56-204ENST00000487252 ARL1P40616 181 aaPredicted RBP9.9□□□□□ -0.82
TRIM56-204ENST00000487252 P2RX1P51575 399 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 CLDN8P56748 225 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 TXNL4AP83876 142 aaKnown RBP9.9□□□□□ -0.82
TRIM56-204ENST00000487252 H3F3AP84243 136 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 ZNF154Q13106 437 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 MTX3Q5HYI7 312 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 MSANTD1Q6ZTZ1 278 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 OR1K1Q8NGR3 316 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms