RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NMRK1Q9NWW6 199 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 NUFIP1Q9UHK0 495 aaKnown RBP2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 WRNQ14191 1432 aaPredicted RBP eCLIP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 A0A1B0GUA9 196 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF716A6NP11 495 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 CCL21O00585 134 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC31A2O15432 143 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 SOX15O60248 233 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 MOSP00540 346 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 CST1P01037 141 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 SERPIND1P05546 499 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 CRYGBP07316 175 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF735P0CB33 412 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TDGF1P13385 188 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 RCC1P18754 421 aaPredicted RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TNNI1P19237 187 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 IFNA8P32881 189 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 NPBWR2P48146 333 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TDGF1P3P51864 188 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 GTF2A1P52655 376 aaPredicted RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 SUB1P53999 127 aaKnown RBP eCLIP2.35□□□□□ -2.035e-7■■■■■ 30.2
SNRNP27-204ENST00000487029 FBXW4P57775 412 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TRDNQ13061 729 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 ARHGAP19Q14CB8 494 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 PPP1R7Q15435 360 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 MPPED2Q15777 294 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 RNASEKQ6P5S7 137 aaKnown RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 SASS6Q6UVJ0 657 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TMEM107Q6UX40 140 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF557Q8N988 423 aaPredicted RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 NPBQ8NG41 125 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 OR56B2PQ8NGI1 322 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 OR2G2Q8NGZ5 317 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 OR6X1Q8NH79 312 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 BLOC1S5Q8TDH9 187 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 RNF139Q8WU17 664 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 RASD2Q96D21 266 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 FAM210AQ96ND0 272 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 SH3GL1Q99961 368 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 KCTD14Q9BQ13 255 aaPredicted RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 CCDC77Q9BR77 488 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TMEM59Q9BXS4 323 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 TM9SF3Q9HD45 589 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 RRAGDQ9NQL2 400 aaPredicted RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 PSMC3IPQ9P2W1 217 aaPredicted RBP2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 XCL2Q9UBD3 114 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 PISDQ9UG56 409 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 MEGF6O75095 1541 aa2.35□□□□□ -2.03
SNRNP27-204ENST00000487029 ZCCHC6Q5VYS8 1495 aaKnown RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 PHF3Q92576 2039 aaKnown RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 HEATR9A2RTY3 570 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 GOLGA8OA6NCC3 632 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 GOLGA8NF8WBI6 632 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 GOSR2O14653 212 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 ALDOBP05062 364 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CCDC172P0C7W6 258 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 TROVE2P10155 538 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 MGMTP16455 207 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CHMLP26374 656 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 GDI1P31150 447 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 HNRNPH3P31942 346 aaKnown RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 RORAP35398 523 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC26A3P40879 764 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 GPR6P46095 362 aaPredicted RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 TFPI2P48307 235 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CSNK1DP48730 415 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF133P52736 654 aaPredicted RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 UGT2B15P54855 530 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 SARNPP82979 210 aaKnown RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 TGFBIQ15582 683 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 FRMPD2BQ6IN97 320 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CNIH2Q6PI25 160 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 C19orf35Q6ZS72 473 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 PUSL1Q8N0Z8 303 aaKnown RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 ZADH2Q8N4Q0 377 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CEP112Q8N8E3 955 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 SPATA4Q8NEY3 305 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 OR4F15Q8NGB8 312 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 ACER1Q8TDN7 264 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 NUP50Q9UKX7 468 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 STARD10Q9Y365 291 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CSDC2Q9Y534 153 aaKnown RBP2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 CACNG2Q9Y698 323 aa2.34□□□□□ -2.03
SNRNP27-204ENST00000487029 PDS5BQ9NTI5 1447 aa2.34□□□□□ -2.04
SNRNP27-204ENST00000487029 UQCRHLA0A096LP55 91 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 IGKV6D-21A0A0A0MT36 114 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 NKX2-6A6NCS4 301 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 A6NDX4 124 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 VGLL3A8MV65 326 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 ERVV-1B6SEH8 477 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 PES1O00541 588 aaKnown RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 WBP4O75554 376 aaKnown RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 UQCRHP07919 91 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 CSF3P09919 207 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 CT62P0C5K7 136 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 GKN3PP0CG01 181 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 CCNCP24863 283 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 MRPS22P82650 360 aaKnown RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 ENPEPQ07075 957 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms