RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PIK3IP1Q96FE7 263 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 Q96M85 177 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 KCNK15Q9H427 330 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 TRPV4Q9HBA0 871 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 TMEM27Q9HBJ8 222 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 PRDM7Q9NQW5 492 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 PRMT8Q9NR22 394 aaPredicted RBP9.71□□□□□ -0.85
CCDC171-208ENST00000486641 MMP26Q9NRE1 261 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 UPB1Q9UBR1 384 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 SERTAD3Q9UJW9 196 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 PLEKHA6Q9Y2H5 1048 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 NOP16Q9Y3C1 178 aaKnown RBP9.71□□□□□ -0.85
CCDC171-208ENST00000486641 GOLGA4Q13439 2230 aaKnown RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 TRAV8-7A0A075B6U6 113 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 NPIPA5A0A0B4J1W7 369 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 C17orf113A0A1B0GUU1 675 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 NPIPA7E9PJI5 369 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 H3BSH0 61 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 M0QYG6 137 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 PRICKLE3O43900 615 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 CLEC3AO75596 197 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 MELTFP08582 738 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 FBP1P09467 338 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 RD3LP0DJH9 198 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 NPIPA8P0DM63 369 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 ERGP11308 486 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 HIST1H1TP22492 207 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 DIO1P49895 249 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 PSMD4P55036 377 aaKnown RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 KCNAB1Q14722 419 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 PON3Q15166 354 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 IRF4Q15306 451 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 MST1LQ2TV78 715 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 Q499Y3 187 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 MRPL2Q5T653 305 aaKnown RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 ATPAF1Q5TC12 328 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 ARHGAP11AQ6P4F7 1023 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 ETV3LQ6ZN32 361 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 PARGQ86W56 976 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 DCUN1D3Q8IWE4 304 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 PCSK9Q8NBP7 692 aaKnown RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 INO80EQ8NBZ0 244 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 OR7G2Q8NG99 324 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 OR10R2Q8NGX6 335 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 GRHL3Q8TE85 626 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 RNF141Q8WVD5 230 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 C14orf79Q96F83 325 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 HSPA12BQ96MM6 686 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF681Q96N22 645 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 CLCC1Q96S66 551 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 MYADMQ96S97 322 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 SDF2Q99470 211 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 NRIP2Q9BQI9 281 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 NAA11Q9BSU3 229 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 VN1R3Q9BXE9 311 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 IL21Q9HBE4 155 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
CCDC171-208ENST00000486641 ABT1Q9ULW3 272 aaKnown RBP9.71□□□□□ -0.86
CCDC171-208ENST00000486641 IGKV1-8A0A0C4DH67 115 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 DUXAA6NLW8 204 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 NUDT19A8MXV4 375 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 WNT11O96014 354 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 CD74P04233 296 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 FAM157CP0CG43 387 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LIPCP11150 499 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LAMP2P13473 410 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 APEHP13798 732 aaKnown RBP9.7□□□□□ -0.86
CCDC171-208ENST00000486641 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC171-208ENST00000486641 CERS1P27544 350 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 SLC6A6P31641 620 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 PJVKQ0ZLH3 352 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 GAS6Q14393 721 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 DUSP5Q16690 384 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 ARHGAP11BQ3KRB8 267 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 RNF212Q495C1 297 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 AKIRIN2Q53H80 203 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 EIPR1Q53HC9 387 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 MFSD12Q6NUT3 480 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 DBX2Q6ZNG2 339 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 PAQR4Q8N4S7 273 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-208ENST00000486641 STOML3Q8TAV4 291 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 HIST1H2BAQ96A08 127 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 COL26A1Q96A83 441 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 ZBTB8AQ96BR9 441 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 MS4A6EQ96DS6 147 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 MENTQ9BUN1 341 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LGR4Q9BXB1 951 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 SELENOIQ9C0D9 397 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 FBXO34Q9NWN3 711 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 CHRNA9Q9UGM1 479 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 KCNE5Q9UJ90 142 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 IER3IP1Q9Y5U9 82 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 A0A1B0GTH9 108 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 CXorf51AA0A1B0GTR3 108 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 A0A1B0GVT2 93 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LRRC72A6NJI9 287 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 F8VVB4 439 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 F8VWA3 439 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 PEX12O00623 359 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 CLN5O75503 358 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms