RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 ZNF226Q9NYT6 803 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 ZNF229Q9UJW7 825 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 PROCRQ9UNN8 238 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 SIGLEC7Q9Y286 467 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 FZD7O75084 574 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 SMNDC1O75940 238 aaKnown RBP eCLIP15.13■□□□□ 0.01
VIM-205ENST00000485947 CH25HO95992 272 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 PLGP00747 810 aaPredicted RBP15.13■□□□□ 0.01
VIM-205ENST00000485947 BGLAPP02818 100 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 PPP3CBP16298 524 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 FUT1P19526 365 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 CCNA2P20248 432 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 RNPS1Q15287 305 aaKnown RBP15.13■□□□□ 0.01
VIM-205ENST00000485947 ZBED5Q49AG3 693 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 SYT14P1Q58G82 188 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 SLX4IPQ5VYV7 408 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 HBMQ6B0K9 141 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 KRT80Q6KB66 452 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 SMARCD3Q6STE5 483 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 CDC20BQ86Y33 519 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 P3H2Q8IVL5 708 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 DEPDC4Q8N2C3 294 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 OR52L1Q8NGH7 329 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 LINC01560Q8TB33 94 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 FANK1Q8TC84 345 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 KTI12Q96EK9 354 aaPredicted RBP15.13■□□□□ 0.01
VIM-205ENST00000485947 CNBD2Q96M20 576 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 NPAS1Q99742 590 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 FOXC2Q99958 501 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 PRRG3Q9BZD7 231 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 NDEL1Q9GZM8 345 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 OR52D1Q9H346 318 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 NANSQ9NR45 359 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 ST6GALNAC2Q9UJ37 374 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 ITGB1BP2Q9UKP3 347 aa15.13■□□□□ 0.01
VIM-205ENST00000485947 A0A0J9YW62 118 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 SHISA8B8ZZ34 492 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 C16orf97H3BN30 126 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 PTP4A3O75365 173 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 AQP8O94778 261 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 ASAH2BP0C7U1 165 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 POU1F1P28069 291 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 EPHA2P29317 976 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 RPS5P46782 204 aaKnown RBP15.12■□□□□ 0.01
VIM-205ENST00000485947 PRPS1P60891 318 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 CDC42P60953 191 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 RPS4XP62701 263 aaKnown RBP15.12■□□□□ 0.01
VIM-205ENST00000485947 CDK5Q00535 292 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 SNTB1Q13884 538 aaKnown RBP15.12■□□□□ 0.01
VIM-205ENST00000485947 SLC27A4Q6P1M0 643 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 VWA1Q6PCB0 445 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 ZNF474Q6S9Z5 364 aaPredicted RBP15.12■□□□□ 0.01
VIM-205ENST00000485947 PLXDC2Q6UX71 529 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 THAP5Q7Z6K1 395 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 MEX3DQ86XN8 651 aaKnown RBP15.12■□□□□ 0.01
VIM-205ENST00000485947 C10orf53Q8N6V4 93 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 OR13C2Q8NGS9 318 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 MFSD8Q8NHS3 518 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 TAAR8Q969N4 342 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 MBD6Q96DN6 1003 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 ZNF570Q96NI8 536 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 MUS81Q96NY9 551 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 PTDSS2Q9BVG9 487 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 TEX12Q9BXU0 123 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 OR10A4Q9H209 315 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 CXXC4Q9H2H0 198 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 EGLN3Q9H6Z9 239 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 TBC1D23Q9NUY8 699 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 HDGFL3Q9Y3E1 203 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 NIPBLQ6KC79 2804 aaeCLIP15.12■□□□□ 0.01
VIM-205ENST00000485947 FBN3Q75N90 2809 aa15.12■□□□□ 0.01
VIM-205ENST00000485947 ZC3H12DA2A288 527 aaKnown RBP15.11■□□□□ 0.01
VIM-205ENST00000485947 EFNA2O43921 213 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 CXCL13O43927 109 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 NDUFB2O95178 105 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 HIST1H2ABP04908 130 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 GNAO1P09471 354 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 DNASE1P24855 282 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 IDUAP35475 653 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 UGT2B10P36537 528 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 GIPRP48546 466 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 PDK3Q15120 406 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 C12orf73Q69YU5 71 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 BEND4Q6ZU67 534 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 HIST3H2AQ7L7L0 130 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 OR8D4Q8NGM9 314 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 HIST1H2ACQ93077 130 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 NR1H4Q96RI1 486 aaPredicted RBP15.11■□□□□ 0.01
VIM-205ENST00000485947 TAPBPLQ9BX59 468 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 TSSK6Q9BXA6 273 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 PLA2G12AQ9BZM1 189 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 BAIAP2Q9UQB8 552 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 HIF3AQ9Y2N7 669 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 CORINQ9Y5Q5 1042 aa15.11■□□□□ 0.01
VIM-205ENST00000485947 TRAV27A0A087WT01 109 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 TNFSF11O14788 317 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 MPZL2O60487 215 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 CLIC3O95833 236 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 HRGP04196 525 aa15.1■□□□□ 0.01
VIM-205ENST00000485947 TSPAN19P0C672 248 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms