RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 EXPH5Q8NEV8 1989 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 BSNQ9UPA5 3926 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 GOLGA4Q13439 2230 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 NBEAQ8NFP9 2946 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 CCDC88CQ9P219 2028 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 A0A1W2PPK0 400 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 FAM159BA6NKW6 160 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 CXorf49A8MYA2 514 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 H0YGG7 62 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 UGDHO60701 494 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 OR2F2O95006 317 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MED26O95402 600 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PPP3CBP16298 524 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PRR20EP86478 221 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PRR20CP86479 221 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PRR20DP86480 221 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PRR20BP86481 221 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PRR20AP86496 221 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 TAF13Q15543 124 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 WASHC2DQ5SRD0 308 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 IL23RQ5VWK5 629 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 SBSNQ6UWP8 590 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 VN1R4Q7Z5H5 301 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 KCNMB4Q86W47 210 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 C17orf78Q8N4C9 275 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 ZADH2Q8N4Q0 377 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MDS2Q8NDY4 140 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 FDCSPQ8NFU4 85 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 OR52I2Q8NH67 350 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MCOLN3Q8TDD5 553 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MARVELD3Q96A59 401 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 CCDC124Q96CT7 223 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 NARFLQ9H6Q4 476 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PLCXD1Q9NUJ7 323 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PDE10AQ9Y233 779 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 ANKUB1A6NFN9 424 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 NOTOA8MTQ0 251 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 K7EM74 188 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 GMDSO60547 372 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 SNAPINO95295 136 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 RNF224P0DH78 156 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 RPA3P35244 121 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MAP3K8P41279 467 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 UBE2KP61086 200 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PSPHP78330 225 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MRPS25P82663 173 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 Q0VFX4 171 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 MTX3Q5HYI7 312 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 C6orf10Q5SRN2 563 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 TIGD3Q6B0B8 471 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 RNF165Q6ZSG1 346 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 DPY19L4Q7Z388 723 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 CYP4Z2PQ8N1L4 340 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 OR2AJ1Q8NGZ0 328 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 RP9Q8TA86 221 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 SLC38A4Q969I6 547 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 PHF21AQ96BD5 680 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 SLC25A36Q96CQ1 311 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 GPR22Q99680 433 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 SRRQ9GZT4 340 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 RHOJQ9H4E5 214 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 Q9N2J8 555 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 ABCB9Q9NP78 766 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 GAR1Q9NY12 217 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 TAS2R9Q9NYW1 312 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 GALPQ9UBC7 116 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 C19orf25Q9UFG5 118 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF346Q9UL40 294 aaKnown RBP4.74□□□□□ -1.65
CCDC39-205ENST00000485055 CEPT1Q9Y6K0 416 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 V9GYQ6 96 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 ACACAQ13085 2346 aa4.74□□□□□ -1.65
CCDC39-205ENST00000485055 DOCK10Q96BY6 2186 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 CCL22O00626 93 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 XRCC3O43542 346 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 RAB4AP20338 218 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 FBLP22087 321 aaKnown RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 CXCR2P25025 360 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 GIFP27352 417 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 IER3P46695 156 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 GPR12P47775 334 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 AVPR1BP47901 424 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 UQCRFS1P47985 274 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 GLRBP48167 497 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ALDH3B2P48448 385 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 CEBPGP53567 150 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 MAPK12P53778 367 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 NAA20P61599 178 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 LCN2P80188 198 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 CRYZQ08257 329 aaKnown RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF169Q14929 603 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 INPP5JQ15735 1006 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 KCNMB1Q16558 191 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ACKR1Q16570 336 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 AGAP7PQ5VUJ5 663 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 MBOAT1Q6ZNC8 495 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 LAS2Q8IYD9 372 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 LNX2Q8N448 690 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 C1orf52Q8N6N3 182 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms