RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 CRYBB2P43320 205 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 SLC10A7Q0GE19 358 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 VGLL4Q14135 290 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 PAN3Q58A45 887 aaKnown RBP4.9□□□□□ -1.63
UBR3-210ENST00000484596 METTL11BQ5VVY1 283 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 TMEM107Q6UX40 140 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 ANGPTL8Q6UXH0 198 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 CEP112Q8N8E3 955 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 OR1L6Q8NGR2 347 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 FAM110BQ8TC76 370 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 NUS1Q96E22 293 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 IFT74Q96LB3 600 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 C12orf42Q96LP6 360 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 FAM210AQ96ND0 272 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 REEP4Q9H6H4 257 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 NT5MQ9NPB1 228 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 GLRX2Q9NS18 164 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 OR1A1Q9P1Q5 309 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 PEX16Q9Y5Y5 336 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 FRMPD3Q5JV73 1810 aa4.9□□□□□ -1.63
UBR3-210ENST00000484596 IGKV6D-41A0A0C4DH26 115 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 SMIM28A0A1B0GU29 152 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 TCRBV9S1A1TA0A576 114 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 LRRIQ4A6NIV6 560 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 CACNG3O60359 315 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 LALBAP00709 142 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 CST1P01037 141 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 GAPDHP04406 335 aaKnown RBP4.89□□□□□ -1.63
UBR3-210ENST00000484596 ASGR1P07306 291 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 CRYGBP07316 175 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 ZNF853P0CG23 659 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 TNNI1P19237 187 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 PKNOX1P55347 436 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 RPS14P62263 151 aaKnown RBP4.89□□□□□ -1.63
UBR3-210ENST00000484596 CHRNB3Q05901 458 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 DUSP7Q16829 419 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 XKR7Q5GH72 579 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 LRRC66Q68CR7 880 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 GPR65Q8IYL9 337 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 OR2L3Q8NG85 312 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 OR52H1Q8NGJ2 320 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 OR2A12Q8NGT7 310 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 OR56B4Q8NH76 319 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 AGR3Q8TD06 166 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 ZNF641Q96N77 438 aaPredicted RBP4.89□□□□□ -1.63
UBR3-210ENST00000484596 TBX15Q96SF7 602 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 TMCO1Q9UM00 188 aa4.89□□□□□ -1.63
UBR3-210ENST00000484596 USP42Q9H9J4 1324 aaKnown RBP4.89□□□□□ -1.63
UBR3-210ENST00000484596 TCP11X1B4DZS4 312 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 CDX4O14627 284 aaPredicted RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 ZNF254O75437 659 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 SLITRK3O94933 977 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 STSP08842 583 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 VDAC1P21796 283 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 CHMLP26374 656 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 SYKP43405 635 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 PLP1P60201 277 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 ASPHQ12797 758 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 GRB7Q14451 532 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 RAET1LQ5VY80 246 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 APOBEC3FQ8IUX4 373 aaKnown RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 NRMQ8IXM6 262 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 GPR137CQ8N3F9 429 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 PDCL2Q8N4E4 241 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.88□□□□□ -1.63
UBR3-210ENST00000484596 NOL4LQ96MY1 436 aaPredicted RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 PANX2Q96RD6 677 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 MAPKAP1Q9BPZ7 522 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 DEFB126Q9BYW3 111 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 PPA2Q9H2U2 334 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 RBKSQ9H477 322 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 NARFLQ9H6Q4 476 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 EXO5Q9H790 373 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 NEK6Q9HC98 313 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 ZNF275Q9NSD4 429 aaPredicted RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 ZNHIT6Q9NWK9 470 aaKnown RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 CSDC2Q9Y534 153 aaKnown RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 COL4A1P02462 1669 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 WDR19Q8NEZ3 1342 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 LRRC37AA6NMS7 1700 aa4.88□□□□□ -1.63
UBR3-210ENST00000484596 DDX60Q8IY21 1712 aaKnown RBP4.88□□□□□ -1.63
UBR3-210ENST00000484596 SERTM2A0A1B0GWG4 89 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 OXSR1O95747 527 aaPredicted RBP4.87□□□□□ -1.63
UBR3-210ENST00000484596 KRT14P02533 472 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 FGF4P08620 206 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 ANXA8P13928 327 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 CD9P21926 228 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 HNRNPH3P31942 346 aaKnown RBP4.87□□□□□ -1.63
UBR3-210ENST00000484596 OPRD1P41143 372 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 KIR2DS2P43631 304 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 PLK1P53350 603 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 IGLV3-21P80748 117 aaPredicted RBP4.87□□□□□ -1.63
UBR3-210ENST00000484596 KIAA0040Q15053 153 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 PRR30Q53SZ7 412 aaPredicted RBP4.87□□□□□ -1.63
UBR3-210ENST00000484596 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 ZNF658Q5TYW1 1059 aaPredicted RBP4.87□□□□□ -1.63
UBR3-210ENST00000484596 ANXA8L1Q5VT79 327 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 PGAP1Q75T13 922 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 FBXL16Q8N461 479 aa4.87□□□□□ -1.63
UBR3-210ENST00000484596 UFD1Q92890 307 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms