RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PDLIM5Q96HC4 596 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 LYSMD1Q96S90 227 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SELENOIQ9C0D9 397 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF593O00488 134 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 DHRS4L1P0CG22 281 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 MAGEB1P43366 347 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 MEP1BQ16820 701 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 TBC1D28Q2M2D7 210 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SYT13Q7L8C5 426 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 C19orf47Q8N9M1 422 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 GJC3Q8NFK1 279 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 HHIPL1Q96JK4 782 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 A4GALTQ9NPC4 353 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 NECAP2Q9NVZ3 263 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 VAPAQ9P0L0 249 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PHF3Q92576 2039 aaKnown RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RPS10-NUDT3A0A1W2PQS6 291 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RPS10P46783 165 aaKnown RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 NKX2-5P52952 324 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 GLYR1Q49A26 553 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ADAMTSL4Q6UY14 1074 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 OR2T11Q8NH01 316 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 UBTD2Q8WUN7 234 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF355PQ9NSJ1 428 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 CHRNA9Q9UGM1 479 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 FBXL4Q9UKA2 621 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ARAP2Q8WZ64 1704 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 KDM4EB2RXH2 506 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 HPNP05981 417 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TRAPPC2P0DI81 140 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TRAPPC2BP0DI82 140 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RFX2P48378 723 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 EXT1Q16394 746 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TAZQ16635 292 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 YIF1BQ5BJH7 314 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 WDTC1Q8N5D0 677 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 MDGA1Q8NFP4 955 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TMEM43Q9BTV4 400 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RIMS4Q9H426 269 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 EXO1Q9UQ84 846 aaKnown RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 KIR2DS1A0A191URI9 304 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 SERINC4A6NH21 518 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 KIR2DS4P43632 304 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 KIR2DS1Q14954 304 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 C18orf21Q32NC0 220 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 HIST2H3AQ71DI3 136 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 PRR22Q8IZ63 422 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 GGHQ92820 318 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ZPBPQ9BS86 351 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 APOA2P02652 100 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 CEBPBP17676 345 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 SIRPAP78324 504 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 SLC35D3Q5M8T2 416 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 DOK4Q8TEW6 326 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 FKRPQ9H9S5 495 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 SIAEQ9HAT2 523 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF91Q05481 1191 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 Q6ZTK2 550 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RNF141Q8WVD5 230 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 SORT1Q99523 831 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 NOSIPQ9Y314 301 aaKnown RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TACR1P25103 407 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 HTR1FP30939 366 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 KLK4Q9Y5K2 254 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 A3GALT2U3KPV4 340 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 HEATR5AQ86XA9 2040 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 KLRC4-KLRK1H3BQV0 150 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF728P0DKX0 622 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 FOLR1P15328 257 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 OR7E24Q6IFN5 339 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TFAP2EQ6VUC0 442 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 COX15Q7KZN9 410 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 MED13LQ71F56 2210 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 SCN4AP35499 1836 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 POU3F3P20264 500 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 HOXA11P31270 313 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 OR1D4P47884 311 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 GABREP78334 506 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 BAXQ07812 192 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 C4orf17Q53FE4 359 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TANGO2Q6ICL3 276 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 METTL17Q9H7H0 456 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-212ENST00000480614 GJD2Q9UKL4 321 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RNF150Q9ULK6 438 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 RCE1Q9Y256 329 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TLCD2A6NGC4 264 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 J3QR89 54 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 BET1O15155 118 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 LDB3O75112 727 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 GIPRP48546 466 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 MBOAT2Q6ZWT7 520 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 TXLNGYQ9BZA5 131 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 ACKR4Q9NPB9 350 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 WASH6PQ9NQA3 447 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 PCDHGA1Q9Y5H4 931 aa8.85□□□□□ -0.99
VEGFA-212ENST00000480614 STMND1H3BQB6 276 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CNIH1O95406 144 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF93P35789 620 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms