RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.02	□□□□□ -0.8
APTX-223	ENST00000479656	EXO5	Q9H790	373 aa		10.02	□□□□□ -0.8
APTX-223	ENST00000479656	ZDHHC11	Q9H8X9	412 aa		10.02	□□□□□ -0.8
APTX-223	ENST00000479656	TNFRSF10D	Q9UBN6	386 aa		10.02	□□□□□ -0.8
APTX-223	ENST00000479656	WARS2	Q9UGM6	360 aa	Known RBP	10.02	□□□□□ -0.8
APTX-223	ENST00000479656	NPIPA1	Q9UND3	350 aa		10.02	□□□□□ -0.8
APTX-223	ENST00000479656	PCDHGB1	Q9Y5G3	927 aa		10.02	□□□□□ -0.8
APTX-223	ENST00000479656	URB1	O60287	2271 aa	Known RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	FRY	Q5TBA9	3013 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	TRGV5	A0A0B4J1U4	118 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	SLC22A31	A6NKX4	558 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	TFEC	O14948	347 aa	Predicted RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	WISP2	O76076	250 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	REN	P00797	406 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	ZNF43	P17038	809 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	SPI1	P17947	270 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	GSTT1	P30711	240 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	DAP3	P51398	398 aa	Known RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	BID	P55957	195 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	CLDN18	P56856	261 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	CXADR	P78310	365 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	RAB40B	Q12829	278 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656		Q6ZS92	163 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	OR6V1	Q8N148	313 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	SVOP	Q8N4V2	548 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	EXD3	Q8N9H8	876 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	NEIL3	Q8TAT5	605 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	FAR1	Q8WVX9	515 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	ASB10	Q8WXI3	467 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	ROBO4	Q8WZ75	1007 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	ZMYND19	Q96E35	227 aa	Predicted RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	ZNF845	Q96IR2	970 aa	Predicted RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	SYT4	Q9H2B2	425 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	RERGL	Q9H628	205 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	FGF20	Q9NP95	211 aa	Predicted RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	ACOT13	Q9NPJ3	140 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	CLEC2D	Q9UHP7	191 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	RASD1	Q9Y272	281 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	EXOG	Q9Y2C4	368 aa	Known RBP	10.02	□□□□□ -0.81
APTX-223	ENST00000479656	NOX1	Q9Y5S8	564 aa		10.02	□□□□□ -0.81
APTX-223	ENST00000479656	LOC102725191	A0A1B0GVB3	256 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	PRSS37	A4D1T9	235 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656		M0R3G1	203 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	DCTN6	O00399	190 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	SMAD9	O15198	467 aa	Known RBP	10.01	□□□□□ -0.81
APTX-223	ENST00000479656	INMT	O95050	263 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	RAB36	O95755	333 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	ACTL6A	O96019	429 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	LCK	P06239	509 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	MRPL3	P09001	348 aa	Known RBP	10.01	□□□□□ -0.81
APTX-223	ENST00000479656	ZNF708	P17019	499 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	ZNF24	P17028	368 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	JUNB	P17275	347 aa	Predicted RBP	10.01	□□□□□ -0.81
APTX-223	ENST00000479656	PYCR1	P32322	319 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	SLC25A1	P53007	311 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	UCN	P55089	124 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	LGALS3BP	Q08380	585 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	IRF3	Q14653	427 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	PON3	Q15166	354 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	PDSS1	Q5T2R2	415 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	VASN	Q6EMK4	673 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	B3GNT6	Q6ZMB0	384 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	SYT14	Q8NB59	555 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	ZHX1-C8orf76	Q96EF9	292 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	CDCA4	Q9BXL8	241 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	NUAK2	Q9H093	628 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	VCX3A	Q9NNX9	186 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	APC2	O95996	2303 aa		10.01	□□□□□ -0.81
APTX-223	ENST00000479656	SPTBN4	Q9H254	2564 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	IRGM	A1A4Y4	181 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	SLC22A23	A1A5C7	686 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	SLC35F4	A4IF30	521 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656		A6NIZ1	184 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	NPIPB13	A6NJU9	1138 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	NPIPB4	C9JG80	1138 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	DNPH1	O43598	174 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	TRAF3IP2	O43734	574 aa	Predicted RBP	10	□□□□□ -0.81
APTX-223	ENST00000479656	TRMU	O75648	421 aa	Known RBP	10	□□□□□ -0.81
APTX-223	ENST00000479656	VAMP5	O95183	116 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	DCK	P27707	260 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	ETV1	P50549	477 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	RAP1B	P61224	184 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	RAP1A	P62834	184 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	TMED1	Q13445	227 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	RAB39A	Q14964	217 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	BCL2A1	Q16548	175 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	C3AR1	Q16581	482 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	PLEKHN1	Q494U1	663 aa	Predicted RBP	10	□□□□□ -0.81
APTX-223	ENST00000479656	ASB18	Q6ZVZ8	466 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	ADCK1	Q86TW2	530 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	MEIOB	Q8N635	442 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	OR6K6	Q8NGW6	343 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	SMAP2	Q8WU79	429 aa	Predicted RBP	10	□□□□□ -0.81
APTX-223	ENST00000479656	ZNF775	Q96BV0	537 aa	Predicted RBP	10	□□□□□ -0.81
APTX-223	ENST00000479656	TAAR6	Q96RI8	345 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	TIMP4	Q99727	224 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	TIGAR	Q9NQ88	270 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	HAO2	Q9NYQ3	351 aa		10	□□□□□ -0.81
APTX-223	ENST00000479656	VSX1	Q9NZR4	365 aa	Predicted RBP	10	□□□□□ -0.81

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