RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 MGAT4BQ9UQ53 548 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 A0A1W2PRG6 482 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 AQP12BA6NM10 295 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 ZNF99A8MXY4 864 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 BLOC1S5-TXNDC5H3BN57 136 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 ENTPD5O75356 428 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 RAD51DO75771 328 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 BCL10O95999 233 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 WNT11O96014 354 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 IGHMP01871 453 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 IFNGR1P15260 489 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 DAP3P51398 398 aaKnown RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 ZNF133P52736 654 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 FOXG1P55316 489 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 MS4A2Q01362 244 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 IL1RL1Q01638 556 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 ROR2Q01974 943 aaKnown RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 GK3PQ14409 553 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 HIST3H3Q16695 136 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 NRN1LQ496H8 165 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 PODNL1Q6PEZ8 512 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 CDH24Q86UP0 819 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 LSRQ86X29 649 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 WFDC8Q8IUA0 241 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 AQP12AQ8IXF9 295 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 LINC00471Q8N535 108 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 WDR31Q8NA23 367 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 OR1K1Q8NGR3 316 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 FNDC8Q8TC99 324 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 BCL2L2Q92843 193 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 TMEM54Q969K7 222 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 PIK3IP1Q96FE7 263 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 THTPAQ9BU02 230 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 MRPL13Q9BYD1 178 aaKnown RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 MMADHCQ9H3L0 296 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-217ENST00000479161 INIPQ9NRY2 104 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 MED29Q9NX70 200 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 RHCGQ9UBD6 479 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 ST6GALNAC2Q9UJ37 374 aa13.57□□□□□ -0.24
C9orf3-217ENST00000479161 TEP1Q99973 2627 aaKnown RBP13.56□□□□□ -0.24
C9orf3-217ENST00000479161 A0A1W2PPR1 153 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 DNAJC8O75937 253 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-217ENST00000479161 STAMBPO95630 424 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 NR2C1P13056 603 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 PTNP21246 168 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 ATP6V1B2P21281 511 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 FUT4P22083 530 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 PTAFRP25105 342 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 HOXC12P31275 282 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 LIMS1P48059 325 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 FHL1Q13642 323 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 FAM205BPQ63HN1 556 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 PAMR1Q6UXH9 720 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 OAFQ86UD1 273 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 ZDHHC21Q8IVQ6 265 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 ZNF566Q969W8 418 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 PLPPR2Q96GM1 343 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 ALKBH3Q96Q83 286 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-217ENST00000479161 TRIM15Q9C019 465 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 NDEL1Q9GZM8 345 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 TXNIPQ9H3M7 391 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 DENND2DQ9H6A0 471 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-217ENST00000479161 CRLF2Q9HC73 371 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 GLTPQ9NZD2 209 aa13.56□□□□□ -0.24
C9orf3-217ENST00000479161 CRNNQ9UBG3 495 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-217ENST00000479161 ARID1AO14497 2285 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 SH3PXD2BA1X283 911 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 EFCAB9A8MZ26 197 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 C11orf98E9PRG8 122 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 hCG_2039718K7EN88 272 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 CLOCKO15516 846 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 AHCYL1O43865 530 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 GADD45GO95257 159 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 IGHG1P01857 330 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 SAGP10523 405 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-217ENST00000479161 MAKP20794 623 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 IFNGR2P38484 337 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 AQP2P41181 271 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 OMPP47874 163 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 CSNK1A1P48729 337 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 BIDP55957 195 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 LSM11P83369 360 aaKnown RBP eCLIP13.55□□□□□ -0.24
C9orf3-217ENST00000479161 TBRG1Q3YBR2 411 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 FAM98BQ52LJ0 330 aaKnown RBP13.55□□□□□ -0.24
C9orf3-217ENST00000479161 ALG10Q5BKT4 473 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 ARMC4Q5T2S8 1044 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 KLHL24Q6TFL4 600 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 CYP2R1Q6VVX0 501 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 LRRC75AQ8NAA5 344 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 OR4K5Q8NGD3 323 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 ASB10Q8WXI3 467 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 EMC6Q9BV81 110 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms