RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 BGLAPP02818 100 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
VCL-205ENST00000478896 PPIBP23284 216 aaKnown RBP11.41□□□□□ -0.58
VCL-205ENST00000478896 AQP1P29972 269 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 GLRXP35754 106 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 ALDH3B1P43353 468 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 GIPRP48546 466 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 EVX1P49640 407 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 DVL1P1P54792 670 aaPredicted RBP11.41□□□□□ -0.58
VCL-205ENST00000478896 AQP5P55064 265 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 CDK6Q00534 326 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 SCARB2Q14108 478 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 OR1Q1Q15612 314 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 MS4A18Q3C1V0 323 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 GLIPR1L2Q4G1C9 344 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 REP15Q6BDI9 236 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 COMTD1Q86VU5 262 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 RANBP3LQ86VV4 465 aaPredicted RBP11.41□□□□□ -0.58
VCL-205ENST00000478896 SCAIQ8N9R8 606 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 SLC41A3Q96GZ6 507 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 LRR1Q96L50 414 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 ZNF607Q96SK3 696 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 METTL17Q9H7H0 456 aaPredicted RBP11.41□□□□□ -0.58
VCL-205ENST00000478896 B3GNT2Q9NY97 397 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 USH1CQ9Y6N9 552 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 A0A1B0GX12 115 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 PRORSD1PA6NEY8 169 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 C11orf98E9PRG8 122 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 TPST1O60507 370 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 IGFBP1P08833 259 aaPredicted RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 SAGP10523 405 aaPredicted RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 ACHEP22303 614 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 SLC6A2P23975 617 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 CSNK1A1P48729 337 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 MAGOHP61326 146 aaKnown RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 RAB1AP62820 205 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 MAD2L1BPQ15013 274 aaPredicted RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 MSMPQ1L6U9 139 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 SHQ1Q6PI26 577 aaKnown RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 C12orf54Q6X4T0 127 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 BHLHE22Q8NFJ8 381 aaPredicted RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 OR6S1Q8NH40 331 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 RDH5Q92781 318 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 SPDL1Q96EA4 605 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 TXNDC15Q96J42 360 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 MOGAT1Q96PD6 335 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 DENND2DQ9H6A0 471 aaPredicted RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 LPAR2Q9HBW0 351 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 TCF7L2Q9NQB0 619 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 MRPL39Q9NYK5 338 aaKnown RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 SLC25A37Q9NYZ2 338 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 CCDC167Q9P0B6 97 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.4□□□□□ -0.58
VCL-205ENST00000478896 SLC7A8Q9UHI5 535 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 DUSP13Q9UII6 198 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 RAB21Q9UL25 225 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 FZR1Q9UM11 496 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 CORO2BQ9UQ03 480 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 ANGPT4Q9Y264 503 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 GRIP1Q9Y3R0 1128 aa11.4□□□□□ -0.58
VCL-205ENST00000478896 LRRN3E7EW58 273 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 SERPINB7O75635 380 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 OR6A2O95222 327 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 HPXP02790 462 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 ADORA3P0DMS8 318 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 ZNF35P13682 527 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 HOXB9P17482 250 aaPredicted RBP11.39□□□□□ -0.59
VCL-205ENST00000478896 SEC24CP53992 1094 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 SLC18A1P54219 525 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 BIDP55957 195 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 SCGB2A2Q13296 93 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 RAB39AQ14964 217 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 ELFN2Q5R3F8 820 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 LRIF1Q5T3J3 769 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 MEX3DQ86XN8 651 aaKnown RBP11.39□□□□□ -0.59
VCL-205ENST00000478896 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 C10orf111Q8N326 155 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 OR5J2Q8NH18 312 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 CLDND2Q8NHS1 167 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 VAPAQ9P0L0 249 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 SLAMF8Q9P0V8 285 aa11.39□□□□□ -0.59
VCL-205ENST00000478896 EVPLLA8MZ36 301 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 PPIHO43447 177 aaKnown RBP11.38□□□□□ -0.59
VCL-205ENST00000478896 ENTPD5O75356 428 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 MT-ATP6P00846 226 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 TFP02787 698 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 NAT2P11245 290 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 COL8A2P25067 703 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 CDH12P55289 794 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 NKPD1Q17RQ9 610 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 ALKBH6Q3KRA9 238 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 RGS7BPQ6MZT1 257 aaPredicted RBP11.38□□□□□ -0.59
VCL-205ENST00000478896 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 ZNF627Q7L945 461 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 PXKQ7Z7A4 578 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 LRP11Q86VZ4 500 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 MSRB3Q8IXL7 192 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms