RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DMAP1Q9NPF5 467 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 PNO1Q9NRX1 252 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 IL37Q9NZH6 218 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 GNG12Q9UBI6 72 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 MRPS33Q9Y291 106 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 COQ4Q9Y3A0 265 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 ASCC3Q8N3C0 2202 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 RIF1Q5UIP0 2472 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 NUMA1Q14980 2115 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 GVINP1Q7Z2Y8 2422 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TDRD6O60522 2096 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CEP250Q9BV73 2442 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 A0A1W2PQ72 361 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SAGE2PA6NJ88 616 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 A8MXQ7 604 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 NPIPA7E9PJI5 369 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 F8VP50 259 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SPECC1L-ADORA2AF8WAN1 911 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 K7ENP7 123 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 CDX4O14627 284 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC9A3R1O14745 358 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 LATO43561 262 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 NUDT21O43809 227 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 TSC22D2O75157 780 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 DUSP14O95147 198 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 FGFR1OPO95684 399 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 GNA14O95837 355 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 F10P00742 488 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 UGT2B4P06133 528 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 H2BFMP0C1H6 154 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZDHHC11BP0C7U3 371 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 NPIPA8P0DM63 369 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 TDGF1P13385 188 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 PGAM2P15259 253 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 HOXA6P31267 233 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 GBX2P52951 348 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC25A1P53007 311 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 UBE2HP62256 183 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 VLDLRP98155 873 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 RAB40BQ12829 278 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 PNOCQ13519 176 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 KCNJ11Q14654 390 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 LAGE3Q14657 143 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SYPL1Q16563 259 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC5A12Q1EHB4 618 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 TIGITQ495A1 244 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 METTL11BQ5VVY1 283 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 CGB2Q6NT52 195 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 ACSM5Q6NUN0 579 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SASS6Q6UVJ0 657 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SCARA5Q6ZMJ2 495 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 Q6ZR54 194 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 CLEC20AQ6ZU45 233 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 APTXQ7Z2E3 356 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 TMEM110Q86TL2 294 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF683Q8IZ20 524 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 LINC01561Q8N1V8 128 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 ANKFN1Q8N957 763 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 FBXL13Q8NEE6 735 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 CNIH3Q8TBE1 160 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 GTSF1Q8WW33 167 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 EMG1Q92979 244 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 FBXO32Q969P5 355 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCDC127Q96BQ5 260 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 C7orf34Q96L11 122 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 TTC25Q96NG3 672 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC6A7Q99884 636 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 PLA2G2FQ9BZM2 168 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 PPDPFQ9H3Y8 114 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 HEBP1Q9NRV9 189 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 AIPL1Q9NZN9 384 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 GCNT4Q9P109 453 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 RNF14Q9UBS8 474 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 NPIPA1Q9UND3 350 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 OARD1Q9Y530 152 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 CACNA1AO00555 2505 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 VPS13AQ96RL7 3174 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 SPTBN4Q9H254 2564 aa3.01□□□□□ -1.93
CDC42BPA-212ENST00000478573 PCNX2A6NKB5 2137 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 B4DXG7 233 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 E9PLD3 99 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR7A17O14581 309 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 TRDMT1O14717 391 aaKnown RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 HCRTO43612 131 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 PAEPP09466 180 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCDC130P13994 396 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 UQCRC2P22695 453 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 CD80P33681 288 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 GCLMP48507 274 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 EFNA3P52797 238 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 BST2Q10589 180 aaKnown RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 CHIT1Q13231 466 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 CUL2Q13617 745 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 MESDQ14696 234 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 NDUFA9Q16795 377 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 GLYR1Q49A26 553 aaPredicted RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 LRRC23Q53EV4 343 aaPredicted RBP3□□□□□ -1.93
CDC42BPA-212ENST00000478573 UTF1Q5T230 341 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 ATAD3CQ5T2N8 411 aa3□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC22A10Q63ZE4 541 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms